The 2.0 version of rSNPBase

Variant report

Variant rs56797450
Chromosome Location chr1:94293535-94293536
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94279600-94302800 Weak transcription Stomach Smooth Muscle stomach
2 chr1:94283400-94310000 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr1:94284000-94294600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr1:94284200-94306200 Weak transcription Fetal Muscle Trunk muscle
5 chr1:94284200-94311200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr1:94284400-94296000 Weak transcription Fetal Intestine Small intestine
7 chr1:94286400-94294800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr1:94286600-94295600 Enhancers Placenta Amnion Placenta Amnion
9 chr1:94287400-94293600 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr1:94287600-94294000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr1:94288800-94293600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr1:94290000-94296400 Enhancers Placenta Placenta
13 chr1:94290200-94311400 Weak transcription Aorta Aorta
14 chr1:94291200-94294800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr1:94291800-94293600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr1:94292200-94294200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
17 chr1:94292400-94293600 Enhancers Pancreatic Islets Pancreatic Islet
18 chr1:94292400-94294200 Enhancers NHDF-Ad bronchial
19 chr1:94292400-94294400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
20 chr1:94292400-94294800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr1:94292400-94294800 Enhancers HepG2 liver
22 chr1:94292600-94294000 Enhancers Fetal Muscle Leg muscle
23 chr1:94292600-94294800 Enhancers Fetal Adrenal Gland Adrenal Gland
24 chr1:94292600-94303200 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr1:94292800-94294200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr1:94292800-94294200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr1:94292800-94294200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr1:94292800-94294200 Enhancers A549 lung
29 chr1:94292800-94294800 Enhancers HSMM muscle
30 chr1:94292800-94295400 Enhancers H9 Cell Line embryonic stem cell
31 chr1:94292800-94295600 Enhancers H1 Cell Line embryonic stem cell
32 chr1:94293000-94293800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:94293000-94293800 Enhancers Osteobl bone
34 chr1:94293000-94294200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr1:94293000-94294200 Enhancers Muscle Satellite Cultured Cells --
36 chr1:94293000-94294800 Enhancers iPS-20b Cell Line embryonic stem cell
37 chr1:94293000-94295000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr1:94293000-94295000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr1:94293000-94295400 Enhancers ES-WA7 Cell Line embryonic stem cell
40 chr1:94293200-94294600 Weak transcription HSMMtube muscle
41 chr1:94293200-94294800 Enhancers HMEC breast
42 chr1:94293200-94294800 Enhancers NHEK skin
43 chr1:94293200-94295000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr1:94293200-94296600 Weak transcription Lung lung
45 chr1:94293400-94293600 Enhancers ES-I3 Cell Line embryonic stem cell
46 chr1:94293400-94293800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr1:94293400-94293800 Weak transcription HUES64 Cell Line embryonic stem cell
48 chr1:94293400-94293800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
49 chr1:94293400-94294000 Weak transcription NH-A brain
50 chr1:94293400-94294400 Weak transcription HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015