Variant report

Variant	rs569277197
Chromosome Location	chr1:211193895-211193896
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv4410	chr1:211193724-211210571	Enhancers Weak transcription Flanking Active TSS Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211182800-211228600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr1:211184800-211198600	Weak transcription	Brain Hippocampus Middle	brain
3	chr1:211185200-211194000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr1:211187000-211198200	Weak transcription	Brain Angular Gyrus	brain
5	chr1:211187600-211198200	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr1:211190600-211198800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr1:211192400-211194800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr1:211192400-211194800	Weak transcription	A549	lung
9	chr1:211192400-211198400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
10	chr1:211192600-211198400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
11	chr1:211192600-211199800	Weak transcription	Brain Substantia Nigra	brain
12	chr1:211192600-211209000	Weak transcription	HSMMtube	muscle
13	chr1:211193800-211194000	Genic enhancers	HSMM	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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