The 2.0 version of rSNPBase

Variant report

Variant rs569484858
Chromosome Location chr2:181874208-181874209
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:181849400-181880000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr2:181851200-181876200 Weak transcription Brain Inferior Temporal Lobe brain
3 chr2:181856800-181897200 Weak transcription Primary B cells from cord blood blood
4 chr2:181857400-181875000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr2:181857600-181879200 Weak transcription Fetal Muscle Trunk muscle
6 chr2:181857800-181901200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr2:181858200-181878000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr2:181858400-181874400 Weak transcription Osteobl bone
9 chr2:181860000-181894800 Weak transcription Primary hematopoietic stem cells blood
10 chr2:181861400-181875000 Weak transcription Primary T cells from cord blood blood
11 chr2:181864600-181875000 Weak transcription Brain Anterior Caudate brain
12 chr2:181864600-181879000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr2:181865600-181878000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr2:181866600-181875200 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr2:181867000-181875000 Weak transcription iPS-20b Cell Line embryonic stem cell
16 chr2:181867800-181881400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr2:181869400-181879800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr2:181870200-181875200 Weak transcription Primary T helper naive cells fromperipheralblood blood
19 chr2:181870800-181875800 Weak transcription Fetal Brain Female brain
20 chr2:181871000-181875200 Weak transcription Brain Substantia Nigra brain
21 chr2:181871000-181875600 Weak transcription Brain Angular Gyrus brain
22 chr2:181871000-181878600 Weak transcription Aorta Aorta
23 chr2:181871000-181886600 Weak transcription Brain Hippocampus Middle brain
24 chr2:181871200-181880400 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr2:181872400-181875200 Weak transcription Brain Germinal Matrix brain
26 chr2:181873000-181876600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr2:181873200-181885000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr2:181873400-181875200 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr2:181873400-181875400 Weak transcription Brain Cingulate Gyrus brain
30 chr2:181873400-181875400 Weak transcription Fetal Lung lung
31 chr2:181873400-181875400 Weak transcription Stomach Mucosa stomach
32 chr2:181873400-181875400 Weak transcription K562 blood
33 chr2:181873400-181875600 Weak transcription Fetal Stomach stomach
34 chr2:181873400-181876000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr2:181873400-181876000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr2:181873400-181876000 Weak transcription Right Ventricle heart
37 chr2:181873400-181877600 Enhancers Pancreatic Islets Pancreatic Islet
38 chr2:181873400-181878000 Weak transcription Left Ventricle heart
39 chr2:181873400-181901000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr2:181873600-181874800 Weak transcription Fetal Intestine Large intestine
41 chr2:181873600-181874800 Weak transcription Fetal Intestine Small intestine
42 chr2:181873600-181875000 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr2:181873600-181875000 Weak transcription Fetal Heart heart
44 chr2:181873600-181875000 Weak transcription Small Intestine intestine
45 chr2:181873600-181875200 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr2:181873600-181875400 Weak transcription Duodenum Smooth Muscle Duodenum
47 chr2:181873600-181875800 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr2:181873600-181877200 Weak transcription Psoas Muscle Psoas
49 chr2:181873600-181877800 Weak transcription Ovary ovary
50 chr2:181873600-181878000 Weak transcription Gastric stomach

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Last update: Aug 31, 2015