The 2.0 version of rSNPBase

Variant report

Variant rs57025821
Chromosome Location chr13:96352601-96352602
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:96331400-96362200 Weak transcription HSMM muscle
2 chr13:96332400-96360400 Weak transcription NHDF-Ad bronchial
3 chr13:96337600-96356000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr13:96337600-96358800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr13:96337600-96360800 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr13:96337600-96362200 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr13:96337600-96364200 Weak transcription Ovary ovary
8 chr13:96345200-96362200 Weak transcription Duodenum Mucosa Duodenum
9 chr13:96347000-96377600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr13:96347800-96359400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr13:96348600-96353000 Weak transcription Monocytes-CD14+_RO01746 blood
12 chr13:96348600-96360400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr13:96348800-96355800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr13:96348800-96358400 Weak transcription Primary hematopoietic stem cells short term culture blood
15 chr13:96349000-96358000 Weak transcription Primary B cells from cord blood blood
16 chr13:96349200-96362200 Weak transcription Fetal Intestine Large intestine
17 chr13:96349600-96362200 Weak transcription Dnd41 blood
18 chr13:96349800-96355000 Weak transcription HepG2 liver
19 chr13:96349800-96363000 Weak transcription Fetal Lung lung
20 chr13:96350600-96355800 Weak transcription Muscle Satellite Cultured Cells --
21 chr13:96350800-96352800 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr13:96350800-96353200 Weak transcription H1 Cell Line embryonic stem cell
23 chr13:96350800-96353200 Weak transcription Colon Smooth Muscle Colon
24 chr13:96350800-96354800 Weak transcription Esophagus oesophagus
25 chr13:96350800-96355600 Weak transcription HMEC breast
26 chr13:96350800-96363800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr13:96350800-96365400 Weak transcription HSMMtube muscle
28 chr13:96351000-96352800 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr13:96351000-96352800 Weak transcription Small Intestine intestine
30 chr13:96351000-96353000 Weak transcription GM12878-XiMat blood
31 chr13:96351000-96353800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr13:96351000-96355000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr13:96351000-96355400 Weak transcription Liver Liver
34 chr13:96351000-96358800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr13:96351000-96358800 Weak transcription K562 blood
36 chr13:96351000-96359200 Weak transcription Spleen Spleen
37 chr13:96351000-96359800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr13:96351000-96360200 Weak transcription Aorta Aorta
39 chr13:96351000-96362200 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr13:96351000-96362400 Weak transcription HUES6 Cell Line embryonic stem cell
41 chr13:96351000-96362600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr13:96351000-96362600 Weak transcription Adipose Nuclei Adipose
43 chr13:96351000-96363600 Weak transcription Colonic Mucosa Colon
44 chr13:96351000-96365800 Weak transcription Brain Anterior Caudate brain
45 chr13:96351000-96365800 Weak transcription Fetal Brain Male brain
46 chr13:96351000-96368600 Weak transcription Lung lung
47 chr13:96351200-96355600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr13:96351400-96352800 Weak transcription Primary neutrophils fromperipheralblood blood
49 chr13:96351400-96352800 Weak transcription Skeletal Muscle Male skeletal muscle
50 chr13:96351400-96353000 Weak transcription Psoas Muscle Psoas

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Last update: Aug 31, 2015