Variant report

Variant	rs570311322
Chromosome Location	chr8:99528507-99528508
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:99527652..99530534-chr8:99540063..99542504,2	MCF-7	breast:
2	chr8:99524025..99526128-chr8:99527392..99529757,2	MCF-7	breast:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1027362	chr8:99469281-99715845	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv539689	chr8:99469281-99715845	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
3	nsv891218	chr8:99507313-99906221	Weak transcription Flanking Active TSS Enhancers Strong transcription ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
4	nsv891219	chr8:99526819-99643487	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers Active TSS Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:99486600-99536000	Weak transcription	Placenta	Placenta
2	chr8:99490400-99547600	Weak transcription	Ovary	ovary
3	chr8:99500400-99558800	Weak transcription	Aorta	Aorta
4	chr8:99503200-99530600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr8:99503200-99536200	Weak transcription	Liver	Liver
6	chr8:99504600-99536200	Weak transcription	Fetal Lung	lung
7	chr8:99515000-99550800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
8	chr8:99516000-99542800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
9	chr8:99516200-99543000	Weak transcription	GM12878-XiMat	blood
10	chr8:99516800-99542800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
11	chr8:99517800-99538200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr8:99518400-99542800	Weak transcription	Duodenum Mucosa	Duodenum
13	chr8:99518800-99551000	Weak transcription	Rectal Smooth Muscle	rectum
14	chr8:99519000-99543000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr8:99519000-99548400	Weak transcription	Fetal Stomach	stomach
16	chr8:99519200-99530800	Weak transcription	Fetal Muscle Leg	muscle
17	chr8:99519400-99530400	Weak transcription	Cortex derived primary cultured neurospheres	brain
18	chr8:99519600-99536200	Weak transcription	Fetal Muscle Trunk	muscle
19	chr8:99520200-99535200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr8:99520600-99536400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
21	chr8:99523200-99529400	Weak transcription	HSMMtube	muscle
22	chr8:99523200-99530600	Weak transcription	HSMM	muscle
23	chr8:99523400-99536800	Weak transcription	NHEK	skin
24	chr8:99524000-99530000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
25	chr8:99525800-99530400	Weak transcription	Adipose Nuclei	Adipose
26	chr8:99525800-99576400	Weak transcription	Pancreas	Pancrea
27	chr8:99526000-99543200	Weak transcription	Stomach Smooth Muscle	stomach
28	chr8:99526200-99549400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
29	chr8:99526400-99538800	Weak transcription	K562	blood
30	chr8:99526600-99536200	Weak transcription	Left Ventricle	heart
31	chr8:99527400-99536200	Weak transcription	Primary hematopoietic stem cells	blood
32	chr8:99527800-99536600	Weak transcription	Dnd41	blood
33	chr8:99528200-99528800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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