The 2.0 version of rSNPBase

Variant report

Variant rs57043920
Chromosome Location chr2:33610384-33610385
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:33578800-33612200 Weak transcription Fetal Kidney kidney
2 chr2:33581600-33611400 Weak transcription Fetal Stomach stomach
3 chr2:33588400-33624400 Weak transcription Gastric stomach
4 chr2:33589200-33623000 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr2:33590600-33615800 Weak transcription Fetal Muscle Trunk muscle
6 chr2:33590600-33624800 Weak transcription Fetal Adrenal Gland Adrenal Gland
7 chr2:33590800-33612600 Weak transcription Ovary ovary
8 chr2:33591400-33616000 Weak transcription Colon Smooth Muscle Colon
9 chr2:33592000-33624800 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr2:33596200-33614400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr2:33596400-33613800 Weak transcription Liver Liver
12 chr2:33597200-33622200 Weak transcription Fetal Muscle Leg muscle
13 chr2:33602200-33613600 Weak transcription NHLF lung
14 chr2:33603000-33610600 Weak transcription Aorta Aorta
15 chr2:33603200-33610600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr2:33603200-33611200 Weak transcription Osteobl bone
17 chr2:33604200-33613000 Weak transcription NH-A brain
18 chr2:33604200-33614000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr2:33604200-33616600 Weak transcription Muscle Satellite Cultured Cells --
20 chr2:33604200-33624800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr2:33604600-33623600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr2:33604800-33612400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr2:33604800-33612600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr2:33604800-33614000 Weak transcription Cortex derived primary cultured neurospheres brain
25 chr2:33604800-33616200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr2:33604800-33616800 Weak transcription Brain Anterior Caudate brain
27 chr2:33605400-33616000 Weak transcription Brain Hippocampus Middle brain
28 chr2:33606800-33611000 Weak transcription Fetal Lung lung
29 chr2:33607400-33611400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr2:33607600-33616600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr2:33608200-33614200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr2:33609000-33610400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr2:33609400-33614200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr2:33609800-33612600 Weak transcription Right Ventricle heart
35 chr2:33609800-33615000 Weak transcription NHDF-Ad bronchial
36 chr2:33609800-33630200 Weak transcription Fetal Heart heart
37 chr2:33610000-33612600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr2:33610000-33612800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr2:33610000-33612800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
40 chr2:33610000-33622200 Weak transcription Left Ventricle heart
41 chr2:33610200-33610600 Enhancers Stomach Smooth Muscle stomach
42 chr2:33610200-33615000 Weak transcription Psoas Muscle Psoas

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Last update: Aug 31, 2015