Variant report

Variant	rs571437228
Chromosome Location	chr14:38136147-38136148
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:38135828..38138506-chr14:38180627..38182501,2	MCF-7	breast:
2	chr14:38060951..38065801-chr14:38133423..38140633,9	MCF-7	breast:
3	chr14:38050621..38053581-chr14:38135495..38137848,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000129514	Chromatin interaction
ENSG00000139865	Chromatin interaction

Extended variants
information (count: 45 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:45 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530038	chr14:37590543-38336191	Weak transcription Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	58 gene(s)	inside rSNPs	diseases
2	nsv832772	chr14:38030300-38225921	Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
3	nsv916985	chr14:38052347-38838551	Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	59 gene(s)	inside rSNPs	diseases
4	nsv1054995	chr14:38078027-38138176	Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	nsv564350	chr14:38127875-38136369	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
6	nsv564351	chr14:38127875-38137580	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
7	nsv564352	chr14:38127875-38137748	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
8	esv994915	chr14:38129915-38137842	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
9	nsv564354	chr14:38132515-38136369	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
10	nsv564355	chr14:38132515-38136614	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
11	nsv564356	chr14:38132515-38136934	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
12	nsv564357	chr14:38132515-38137580	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
13	nsv564358	chr14:38132515-38137748	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
14	nsv564359	chr14:38132515-38139214	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
15	esv1010397	chr14:38132605-38137752	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
16	esv3530578	chr14:38132983-38137883	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
17	esv3530581	chr14:38133011-38137922	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
18	esv3530579	chr14:38133061-38137895	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
19	esv996830	chr14:38133148-38137812	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
20	esv3530582	chr14:38133149-38137814	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
21	esv20860	chr14:38133554-38137781	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
22	esv1001796	chr14:38134679-38137605	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
23	nsv564360	chr14:38135050-38136369	Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
24	nsv564361	chr14:38135050-38136497	Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
25	nsv564362	chr14:38135050-38136934	Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
26	nsv564363	chr14:38135050-38137033	Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
27	nsv564364	chr14:38135050-38137353	Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
28	nsv564365	chr14:38135050-38137580	Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
29	nsv564366	chr14:38135050-38137748	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
30	nsv564367	chr14:38135050-38139214	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
31	nsv564368	chr14:38135050-38146748	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
32	nsv564369	chr14:38135156-38136497	Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
33	nsv564370	chr14:38135156-38136934	Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
34	nsv564371	chr14:38135156-38137033	Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
35	nsv564372	chr14:38135156-38137353	Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
36	nsv564373	chr14:38135156-38137580	Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
37	nsv564374	chr14:38135156-38137748	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
38	nsv564375	chr14:38135156-38139214	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
39	nsv564376	chr14:38135208-38137748	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
40	nsv564377	chr14:38135284-38137353	Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
41	nsv564378	chr14:38135284-38137748	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
42	nsv564379	chr14:38135498-38136934	Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
43	nsv564380	chr14:38135498-38137353	Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
44	nsv564381	chr14:38135498-38137748	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
45	nsv564382	chr14:38136019-38137748	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:38124800-38138200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr14:38125000-38137600	Weak transcription	NH-A	brain

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