Variant report

Variant rs571755768
Chromosome Location chr19:42746048-42746049
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:42725000-42747000 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr19:42744600-42748800 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
3 chr19:42744800-42746200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
4 chr19:42745000-42748000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
5 chr19:42745200-42748200 Active TSS HSMM muscle
6 chr19:42745400-42746200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
7 chr19:42745400-42746200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
8 chr19:42745400-42746200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr19:42745400-42746200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr19:42745400-42746200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
11 chr19:42745400-42746200 Flanking Active TSS Duodenum Mucosa Duodenum
12 chr19:42745400-42746200 Flanking Active TSS Fetal Brain Female brain
13 chr19:42745400-42746200 Flanking Active TSS Fetal Intestine Small intestine
14 chr19:42745400-42746200 Flanking Active TSS Stomach Smooth Muscle stomach
15 chr19:42745400-42746200 Enhancers Spleen Spleen
16 chr19:42745400-42746200 Flanking Active TSS Dnd41 blood
17 chr19:42745400-42746200 Flanking Active TSS Hela-S3 cervix
18 chr19:42745400-42746200 Flanking Active TSS HUVEC blood vessel
19 chr19:42745400-42746400 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
20 chr19:42745400-42746400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr19:42745400-42746400 Flanking Active TSS Adipose Nuclei Adipose
22 chr19:42745400-42748400 Active TSS H1 Cell Line embryonic stem cell
23 chr19:42745400-42749200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr19:42745600-42746200 Flanking Active TSS Primary T cells from cord blood blood
25 chr19:42745600-42746200 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
26 chr19:42745600-42746200 Flanking Active TSS Liver Liver
27 chr19:42745600-42746200 Flanking Active TSS Brain Angular Gyrus brain
28 chr19:42745600-42746200 Flanking Active TSS Brain Anterior Caudate brain
29 chr19:42745600-42746200 Flanking Active TSS Brain Cingulate Gyrus brain
30 chr19:42745600-42746200 Flanking Active TSS Brain Hippocampus Middle brain
31 chr19:42745600-42746200 Flanking Active TSS Brain Inferior Temporal Lobe brain
32 chr19:42745600-42746200 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
33 chr19:42745600-42746200 Flanking Active TSS Colonic Mucosa Colon
34 chr19:42745600-42746200 Flanking Active TSS Colon Smooth Muscle Colon
35 chr19:42745600-42746200 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
36 chr19:42745600-42746200 Flanking Active TSS Fetal Brain Male brain
37 chr19:42745600-42746200 Flanking Active TSS Fetal Heart heart
38 chr19:42745600-42746200 Flanking Active TSS Fetal Kidney kidney
39 chr19:42745600-42746200 Flanking Active TSS Fetal Muscle Leg muscle
40 chr19:42745600-42746200 Flanking Active TSS Fetal Stomach stomach
41 chr19:42745600-42746200 Flanking Active TSS Rectal Mucosa Donor 29 rectum
42 chr19:42745600-42746200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
43 chr19:42745600-42746200 Flanking Active TSS Rectal Smooth Muscle rectum
44 chr19:42745600-42746200 Flanking Active TSS Skeletal Muscle Male skeletal muscle
45 chr19:42745600-42746400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
46 chr19:42745600-42746400 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
47 chr19:42745600-42746600 Flanking Active TSS Primary B cells from cord blood blood
48 chr19:42745600-42746600 Flanking Active TSS Primary hematopoietic stem cells blood
49 chr19:42745600-42747200 Active TSS Fetal Muscle Trunk muscle
50 chr19:42745600-42748200 Active TSS Right Atrium heart

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