Variant report
| Variant | rs57196300 |
|---|---|
| Chromosome Location | chr12:39757455-39757456 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:39696600-39762200 | Weak transcription | Fetal Brain Male | brain |
| 2 | chr12:39697800-39771800 | Weak transcription | Fetal Kidney | kidney |
| 3 | chr12:39699600-39760600 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 4 | chr12:39721000-39770600 | Weak transcription | Gastric | stomach |
| 5 | chr12:39722800-39767200 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 6 | chr12:39726400-39766600 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 7 | chr12:39726600-39766600 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 8 | chr12:39726600-39766600 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 9 | chr12:39726600-39766800 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 10 | chr12:39726800-39762200 | Weak transcription | Placenta | Placenta |
| 11 | chr12:39726800-39766600 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 12 | chr12:39727000-39758000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 13 | chr12:39727000-39758000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 14 | chr12:39727000-39758200 | Weak transcription | Fetal Intestine Large | intestine |
| 15 | chr12:39727000-39760600 | Weak transcription | Brain Angular Gyrus | brain |
| 16 | chr12:39727000-39761400 | Weak transcription | Fetal Intestine Small | intestine |
| 17 | chr12:39727000-39762400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 18 | chr12:39727000-39767000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 19 | chr12:39727000-39779200 | Weak transcription | Aorta | Aorta |
| 20 | chr12:39735200-39761400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 21 | chr12:39735600-39766600 | Weak transcription | HMEC | breast |
| 22 | chr12:39735600-39766600 | Weak transcription | NHEK | skin |
| 23 | chr12:39737400-39766600 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 24 | chr12:39740600-39761200 | Weak transcription | Brain Substantia Nigra | brain |
| 25 | chr12:39742600-39761400 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 26 | chr12:39743000-39766800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 27 | chr12:39743200-39765800 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 28 | chr12:39745000-39762000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 29 | chr12:39745000-39778600 | Weak transcription | Pancreas | Pancrea |
| 30 | chr12:39748200-39764000 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 31 | chr12:39748400-39765800 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 32 | chr12:39748800-39764000 | Strong transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 33 | chr12:39749000-39764200 | Strong transcription | Cortex derived primary cultured neurospheres | brain |
| 34 | chr12:39749800-39761200 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 35 | chr12:39750200-39761600 | Weak transcription | Small Intestine | intestine |
| 36 | chr12:39750200-39765400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 37 | chr12:39750400-39762000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 38 | chr12:39750600-39760000 | Weak transcription | Hela-S3 | cervix |
| 39 | chr12:39750600-39760400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 40 | chr12:39750800-39762200 | Weak transcription | HepG2 | liver |
| 41 | chr12:39751200-39759600 | Weak transcription | Duodenum Mucosa | Duodenum |
| 42 | chr12:39751200-39761200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 43 | chr12:39751200-39762400 | Weak transcription | Adipose Nuclei | Adipose |
| 44 | chr12:39751200-39762600 | Weak transcription | K562 | blood |
| 45 | chr12:39751400-39758200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 46 | chr12:39751400-39770400 | Weak transcription | Brain Hippocampus Middle | brain |
| 47 | chr12:39751600-39771800 | Weak transcription | Brain Anterior Caudate | brain |
| 48 | chr12:39752000-39765400 | Weak transcription | Left Ventricle | heart |
| 49 | chr12:39752200-39760400 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 50 | chr12:39752200-39762200 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
