Variant report

Variant	rs57218277
Chromosome Location	chr14:32660169-32660170
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10134888	1.00[EUR][1000 genomes]
rs10143850	1.00[EUR][1000 genomes]
rs11849454	1.00[EUR][1000 genomes]
rs12100687	1.00[EUR][1000 genomes]
rs12100688	1.00[EUR][1000 genomes]
rs12100768	1.00[EUR][1000 genomes]
rs12100930	1.00[EUR][1000 genomes]
rs12100931	1.00[EUR][1000 genomes]
rs12101226	1.00[EUR][1000 genomes]
rs17098508	1.00[EUR][1000 genomes]
rs28765407	1.00[EUR][1000 genomes]
rs28802314	1.00[EUR][1000 genomes]
rs28845852	1.00[EUR][1000 genomes]
rs58280109	1.00[EUR][1000 genomes]
rs59021515	1.00[EUR][1000 genomes]
rs59609395	1.00[EUR][1000 genomes]
rs7140954	1.00[EUR][1000 genomes]
rs7152059	1.00[EUR][1000 genomes]
rs7157301	1.00[EUR][1000 genomes]
rs74041589	1.00[EUR][1000 genomes]
rs74041590	1.00[EUR][1000 genomes]
rs74041597	1.00[EUR][1000 genomes]
rs74041599	1.00[EUR][1000 genomes]
rs74041600	1.00[EUR][1000 genomes]
rs8012001	1.00[EUR][1000 genomes]
rs8021655	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832764	chr14:32564468-32723213	Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32659200-32660400	Enhancers	Primary hematopoietic stem cells short term culture	blood
2	chr14:32659400-32660200	Enhancers	Primary B cells from peripheral blood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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