Variant report
| Variant | rs57235111 |
|---|---|
| Chromosome Location | chr13:96588260-96588261 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr13:96495000-96590800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 2 | chr13:96559800-96588600 | Weak transcription | Gastric | stomach |
| 3 | chr13:96571000-96588600 | Weak transcription | Psoas Muscle | Psoas |
| 4 | chr13:96577000-96623200 | Weak transcription | NHLF | lung |
| 5 | chr13:96577200-96598000 | Weak transcription | HMEC | breast |
| 6 | chr13:96577800-96608800 | Weak transcription | NHEK | skin |
| 7 | chr13:96580800-96588600 | ZNF genes & repeats | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 8 | chr13:96581600-96589000 | ZNF genes & repeats | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 9 | chr13:96581600-96589600 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 10 | chr13:96582200-96588400 | Weak transcription | Brain Anterior Caudate | brain |
| 11 | chr13:96583800-96588600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 12 | chr13:96584000-96599200 | Weak transcription | Colonic Mucosa | Colon |
| 13 | chr13:96584200-96588600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 14 | chr13:96584200-96588600 | Weak transcription | Esophagus | oesophagus |
| 15 | chr13:96584200-96588600 | Weak transcription | Pancreas | Pancrea |
| 16 | chr13:96584200-96611000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 17 | chr13:96584600-96592000 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 18 | chr13:96584600-96592200 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 19 | chr13:96584600-96592800 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 20 | chr13:96584800-96589000 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 21 | chr13:96585000-96592600 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 22 | chr13:96585200-96592400 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 23 | chr13:96585800-96592200 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 24 | chr13:96586000-96589000 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 25 | chr13:96586000-96601200 | Weak transcription | NHDF-Ad | bronchial |
| 26 | chr13:96586200-96588400 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
| 27 | chr13:96586200-96589000 | Strong transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 28 | chr13:96586200-96592400 | Strong transcription | HSMM | muscle |
| 29 | chr13:96586400-96588600 | Strong transcription | Placenta | Placenta |
| 30 | chr13:96586400-96588800 | ZNF genes & repeats | Fetal Muscle Leg | muscle |
| 31 | chr13:96586400-96588800 | Strong transcription | Hela-S3 | cervix |
| 32 | chr13:96586400-96589000 | ZNF genes & repeats | ES-I3 Cell Line | embryonic stem cell |
| 33 | chr13:96586400-96589000 | Strong transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 34 | chr13:96586400-96589000 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
| 35 | chr13:96586400-96589000 | Strong transcription | Fetal Kidney | kidney |
| 36 | chr13:96586400-96589000 | Strong transcription | A549 | lung |
| 37 | chr13:96586400-96589000 | ZNF genes & repeats | GM12878-XiMat | blood |
| 38 | chr13:96586400-96589000 | Strong transcription | HSMMtube | muscle |
| 39 | chr13:96586400-96589000 | ZNF genes & repeats | Monocytes-CD14+_RO01746 | blood |
| 40 | chr13:96586400-96591600 | Strong transcription | H1 Cell Line | embryonic stem cell |
| 41 | chr13:96586400-96592200 | Strong transcription | Liver | Liver |
| 42 | chr13:96586600-96588400 | ZNF genes & repeats | Fetal Brain Female | brain |
| 43 | chr13:96586600-96588600 | Strong transcription | Ovary | ovary |
| 44 | chr13:96586600-96589000 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 45 | chr13:96586600-96589000 | ZNF genes & repeats | Fetal Lung | lung |
| 46 | chr13:96586600-96589000 | Strong transcription | Right Ventricle | heart |
| 47 | chr13:96586600-96589200 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 48 | chr13:96586600-96589400 | Strong transcription | Osteobl | bone |
| 49 | chr13:96586600-96592200 | Strong transcription | Adipose Nuclei | Adipose |
| 50 | chr13:96586600-96601400 | Weak transcription | HUVEC | blood vessel |
