Variant report

Variant	rs572599815
Chromosome Location	chr14:72206007-72206008
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:72201335..72203347-chr14:72205708..72208786,4	MCF-7	breast:
2	chr14:72191378..72193291-chr14:72204518..72207982,3	MCF-7	breast:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3398985	chr14:71927884-72404676	Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv530794	chr14:72113818-73034008	Enhancers Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
3	nsv1047559	chr14:72151736-72282151	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv84708	chr14:72204904-72209070	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:113 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:72182200-72207400	Strong transcription	GM12878-XiMat	blood
2	chr14:72185800-72206200	Strong transcription	Primary B cells from peripheral blood	blood
3	chr14:72187600-72206200	Strong transcription	Dnd41	blood
4	chr14:72187600-72207600	Strong transcription	Monocytes-CD14+_RO01746	blood
5	chr14:72187800-72206200	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
6	chr14:72188200-72206400	Strong transcription	Primary T cells from cord blood	blood
7	chr14:72188800-72207600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr14:72189800-72206600	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
9	chr14:72189800-72206800	Strong transcription	Primary neutrophils fromperipheralblood	blood
10	chr14:72189800-72206800	Strong transcription	Primary B cells from cord blood	blood
11	chr14:72190600-72214200	Weak transcription	K562	blood
12	chr14:72193000-72207200	Strong transcription	Primary monocytes fromperipheralblood	blood
13	chr14:72194600-72214800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr14:72195000-72206400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr14:72195200-72206600	Strong transcription	Thymus	Thymus
16	chr14:72197200-72206600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
17	chr14:72200400-72206400	Strong transcription	Rectal Smooth Muscle	rectum
18	chr14:72200400-72207200	Strong transcription	Aorta	Aorta
19	chr14:72200600-72207400	Strong transcription	HSMM	muscle
20	chr14:72200800-72206200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
21	chr14:72200800-72207200	Strong transcription	Muscle Satellite Cultured Cells	--
22	chr14:72200800-72207400	Strong transcription	Osteobl	bone
23	chr14:72200800-72210200	Weak transcription	Small Intestine	intestine
24	chr14:72201000-72207200	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
25	chr14:72201000-72208800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
26	chr14:72201600-72206600	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
27	chr14:72201600-72207200	Strong transcription	NH-A	brain
28	chr14:72202000-72206200	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
29	chr14:72202200-72207800	Weak transcription	Stomach Mucosa	stomach
30	chr14:72202400-72207000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
31	chr14:72202600-72207600	Weak transcription	Primary hematopoietic stem cells	blood
32	chr14:72202600-72207600	Weak transcription	Fetal Muscle Trunk	muscle
33	chr14:72202800-72207600	Weak transcription	Fetal Heart	heart
34	chr14:72202800-72207800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
35	chr14:72202800-72209600	Weak transcription	Skeletal Muscle Male	skeletal muscle
36	chr14:72203000-72206400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
37	chr14:72203400-72207000	Weak transcription	Skeletal Muscle Female	skeletal muscle
38	chr14:72203400-72207600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
39	chr14:72203400-72208000	Weak transcription	NHDF-Ad	bronchial
40	chr14:72203400-72208200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
41	chr14:72203600-72206200	Weak transcription	HUES64 Cell Line	embryonic stem cell
42	chr14:72203600-72207200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
43	chr14:72203800-72206200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
44	chr14:72203800-72206800	Weak transcription	Hela-S3	cervix
45	chr14:72203800-72208400	Weak transcription	Right Ventricle	heart
46	chr14:72203800-72213400	Weak transcription	H9 Cell Line	embryonic stem cell
47	chr14:72204000-72207400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
48	chr14:72204000-72208400	Weak transcription	Esophagus	oesophagus
49	chr14:72204400-72207400	Weak transcription	Pancreatic Islets	Pancreatic Islet
50	chr14:72204400-72208000	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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