Variant report
| Variant | rs57280061 |
|---|---|
| Chromosome Location | chr6:64414728-64414729 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:64347000-64422400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 2 | chr6:64354000-64421200 | Weak transcription | Gastric | stomach |
| 3 | chr6:64387200-64421000 | Weak transcription | Aorta | Aorta |
| 4 | chr6:64387400-64419400 | Weak transcription | Fetal Heart | heart |
| 5 | chr6:64387600-64421000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 6 | chr6:64387600-64423400 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 7 | chr6:64390000-64417600 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 8 | chr6:64392200-64422400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 9 | chr6:64392800-64425200 | Weak transcription | NHEK | skin |
| 10 | chr6:64393200-64417600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 11 | chr6:64393400-64423400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 12 | chr6:64395000-64414800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 13 | chr6:64395400-64420200 | Weak transcription | Fetal Brain Male | brain |
| 14 | chr6:64395800-64420200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 15 | chr6:64397400-64422400 | Weak transcription | Pancreas | Pancrea |
| 16 | chr6:64399200-64418600 | Weak transcription | A549 | lung |
| 17 | chr6:64401000-64426400 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 18 | chr6:64402000-64419200 | Weak transcription | Brain Substantia Nigra | brain |
| 19 | chr6:64404000-64424600 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 20 | chr6:64404200-64417400 | Strong transcription | Fetal Lung | lung |
| 21 | chr6:64404200-64423600 | Strong transcription | Dnd41 | blood |
| 22 | chr6:64404200-64423800 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 23 | chr6:64404200-64424200 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 24 | chr6:64404200-64424600 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 25 | chr6:64404200-64424600 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 26 | chr6:64404200-64426600 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 27 | chr6:64404400-64417600 | Strong transcription | HepG2 | liver |
| 28 | chr6:64404400-64424200 | Strong transcription | Fetal Thymus | thymus |
| 29 | chr6:64404400-64424800 | Strong transcription | Primary T cells fromperipheralblood | blood |
| 30 | chr6:64404400-64425000 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 31 | chr6:64404400-64426800 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 32 | chr6:64404800-64420600 | Weak transcription | Small Intestine | intestine |
| 33 | chr6:64404800-64424200 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 34 | chr6:64404800-64424200 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 35 | chr6:64404800-64425000 | Strong transcription | Primary B cells from peripheral blood | blood |
| 36 | chr6:64405000-64417600 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 37 | chr6:64405000-64417600 | Strong transcription | Primary B cells from cord blood | blood |
| 38 | chr6:64405000-64424200 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 39 | chr6:64405400-64426400 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 40 | chr6:64405600-64422200 | Weak transcription | Right Ventricle | heart |
| 41 | chr6:64406000-64426400 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 42 | chr6:64406200-64424200 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 43 | chr6:64406400-64423600 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 44 | chr6:64406600-64420600 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 45 | chr6:64406600-64423600 | Strong transcription | Primary T helper cells PMA-I stimulated | -- |
| 46 | chr6:64407200-64419000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 47 | chr6:64407800-64422400 | Weak transcription | Spleen | Spleen |
| 48 | chr6:64408000-64416800 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 49 | chr6:64408000-64423800 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 50 | chr6:64408200-64423600 | Strong transcription | iPS-18 Cell Line | embryonic stem cell |
