Variant report

Variant rs57339940
Chromosome Location chr11:35329109-35329110
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:35314200-35329200 Weak transcription Fetal Brain Male brain
2 chr11:35324000-35336200 Enhancers Primary monocytes fromperipheralblood blood
3 chr11:35324400-35343200 Weak transcription Gastric stomach
4 chr11:35325200-35339000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr11:35325600-35339200 Strong transcription Cortex derived primary cultured neurospheres brain
6 chr11:35327000-35333400 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr11:35327000-35343400 Weak transcription Fetal Lung lung
8 chr11:35327200-35340600 Weak transcription Brain Substantia Nigra brain
9 chr11:35327400-35329400 Strong transcription HepG2 liver
10 chr11:35327400-35329800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr11:35327400-35339000 Weak transcription Aorta Aorta
12 chr11:35327600-35329200 Weak transcription Primary neutrophils fromperipheralblood blood
13 chr11:35327600-35329200 Weak transcription Primary B cells from cord blood blood
14 chr11:35327600-35330800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr11:35327600-35335200 Weak transcription Esophagus oesophagus
16 chr11:35327600-35336600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr11:35327600-35337400 Weak transcription NHDF-Ad bronchial
18 chr11:35327800-35329200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr11:35327800-35329200 Weak transcription Brain Inferior Temporal Lobe brain
20 chr11:35327800-35329400 Weak transcription Placenta Placenta
21 chr11:35327800-35330800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr11:35327800-35332200 Weak transcription Primary B cells from peripheral blood blood
23 chr11:35327800-35333000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr11:35327800-35333200 Weak transcription GM12878-XiMat blood
25 chr11:35327800-35334800 Weak transcription Primary hematopoietic stem cells blood
26 chr11:35327800-35334800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr11:35327800-35334800 Weak transcription Pancreas Pancrea
28 chr11:35327800-35335000 Weak transcription Brain Germinal Matrix brain
29 chr11:35327800-35335200 Weak transcription Left Ventricle heart
30 chr11:35327800-35335200 Weak transcription Spleen Spleen
31 chr11:35327800-35340400 Weak transcription Brain Hippocampus Middle brain
32 chr11:35327800-35340800 Weak transcription NHLF lung
33 chr11:35328400-35329400 Enhancers Skeletal Muscle Male skeletal muscle
34 chr11:35328600-35329400 Strong transcription Fetal Adrenal Gland Adrenal Gland
35 chr11:35328600-35329600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
36 chr11:35328600-35329600 Enhancers Skeletal Muscle Female skeletal muscle
37 chr11:35328600-35329800 Strong transcription Liver Liver
38 chr11:35328800-35330200 Genic enhancers Fetal Brain Female brain
39 chr11:35329000-35329600 Enhancers Brain Anterior Caudate brain
40 chr11:35329000-35329800 Enhancers Brain Angular Gyrus brain
41 chr11:35329000-35329800 Genic enhancers Brain Cingulate Gyrus brain
42 chr11:35329000-35334000 Flanking Active TSS Monocytes-CD14+_RO01746 blood

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