Variant report

Variant	rs57341812
Chromosome Location	chr7:145169546-145169547
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10251260	1.00[ASN][1000 genomes]
rs11770321	1.00[ASN][1000 genomes]
rs11772811	1.00[ASN][1000 genomes]
rs13225537	1.00[ASN][1000 genomes]
rs13228818	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13239688	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13243922	1.00[ASN][1000 genomes]
rs1990078	1.00[ASN][1000 genomes]
rs6976454	1.00[ASN][1000 genomes]
rs71528983	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1026333	chr7:145094377-145283848	Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv1029730	chr7:145125332-145253704	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:145169000-145171000	Weak transcription	Fetal Kidney	kidney

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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