Variant report

Variant rs57351606
Chromosome Location chr19:52096903-52096904
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52077000-52097000 Weak transcription Hela-S3 cervix
2 chr19:52091600-52097000 Weak transcription Aorta Aorta
3 chr19:52091800-52097000 Weak transcription Fetal Lung lung
4 chr19:52091800-52097000 Weak transcription Osteobl bone
5 chr19:52092000-52097000 Weak transcription HUVEC blood vessel
6 chr19:52096000-52097000 Enhancers Placenta Placenta
7 chr19:52096200-52097000 Enhancers Primary T cells fromperipheralblood blood
8 chr19:52096200-52097000 Enhancers Lung lung
9 chr19:52096200-52097000 Enhancers Spleen Spleen
10 chr19:52096200-52097200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
11 chr19:52096400-52097000 Enhancers Primary Natural Killer cells fromperipheralblood blood
12 chr19:52096400-52097000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
13 chr19:52096400-52097000 Enhancers Esophagus oesophagus
14 chr19:52096400-52097000 Enhancers Placenta Amnion Placenta Amnion
15 chr19:52096400-52097000 Enhancers Psoas Muscle Psoas
16 chr19:52096400-52097000 Enhancers Right Atrium heart
17 chr19:52096400-52097000 Enhancers Stomach Mucosa stomach
18 chr19:52096400-52097200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr19:52096400-52097200 Flanking Active TSS Brain Angular Gyrus brain
20 chr19:52096400-52097200 Flanking Active TSS Brain Anterior Caudate brain
21 chr19:52096400-52097200 Flanking Active TSS Brain Cingulate Gyrus brain
22 chr19:52096400-52097200 Flanking Active TSS Brain Inferior Temporal Lobe brain
23 chr19:52096400-52097200 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
24 chr19:52096400-52097200 Enhancers Sigmoid Colon Sigmoid Colon
25 chr19:52096400-52097200 Flanking Active TSS Stomach Smooth Muscle stomach
26 chr19:52096400-52097200 Flanking Active TSS GM12878-XiMat blood
27 chr19:52096400-52097400 Flanking Active TSS Rectal Mucosa Donor 29 rectum
28 chr19:52096400-52097400 Flanking Active TSS Dnd41 blood
29 chr19:52096400-52097600 Flanking Active TSS Duodenum Mucosa Duodenum
30 chr19:52096400-52097600 Flanking Active TSS Skeletal Muscle Male skeletal muscle
31 chr19:52096600-52097000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr19:52096600-52097000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
33 chr19:52096600-52097000 Enhancers Primary monocytes fromperipheralblood blood
34 chr19:52096600-52097000 Enhancers Primary B cells from cord blood blood
35 chr19:52096600-52097000 Enhancers Primary B cells from peripheral blood blood
36 chr19:52096600-52097000 Enhancers Primary T helper 17 cells PMA-I stimulated --
37 chr19:52096600-52097000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
38 chr19:52096600-52097000 Enhancers Colon Smooth Muscle Colon
39 chr19:52096600-52097000 Enhancers Fetal Intestine Small intestine
40 chr19:52096600-52097000 Enhancers Fetal Thymus thymus
41 chr19:52096600-52097000 Enhancers Ovary ovary
42 chr19:52096600-52097000 Enhancers Right Ventricle heart
43 chr19:52096600-52097000 Enhancers Monocytes-CD14+_RO01746 blood
44 chr19:52096600-52097200 Flanking Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr19:52096600-52097200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
46 chr19:52096600-52097200 Flanking Active TSS Brain Germinal Matrix brain
47 chr19:52096600-52097200 Flanking Active TSS Brain Hippocampus Middle brain
48 chr19:52096600-52097200 Flanking Active TSS Brain Substantia Nigra brain
49 chr19:52096600-52097200 Flanking Active TSS Duodenum Smooth Muscle Duodenum
50 chr19:52096600-52097200 Flanking Active TSS Fetal Brain Female brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links