The 2.0 version of rSNPBase

Variant report

Variant rs57366716
Chromosome Location chr12:63122716-63122717
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:63096600-63157000 Weak transcription Pancreas Pancrea
2 chr12:63107200-63125000 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr12:63114000-63129400 Weak transcription Liver Liver
4 chr12:63115000-63123000 Weak transcription Fetal Lung lung
5 chr12:63115000-63124000 Weak transcription Adipose Nuclei Adipose
6 chr12:63115000-63124600 Weak transcription Aorta Aorta
7 chr12:63115000-63125800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr12:63116600-63125000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr12:63117600-63124800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr12:63119200-63122800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr12:63119200-63122800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr12:63119200-63122800 Weak transcription Colon Smooth Muscle Colon
13 chr12:63119200-63123000 Weak transcription Fetal Muscle Leg muscle
14 chr12:63119200-63123200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr12:63119200-63124600 Weak transcription Duodenum Mucosa Duodenum
16 chr12:63119200-63124600 Weak transcription Fetal Kidney kidney
17 chr12:63119200-63124600 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr12:63119400-63124000 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr12:63119600-63123400 Weak transcription ES-WA7 Cell Line embryonic stem cell
20 chr12:63119600-63124800 Weak transcription Primary B cells from cord blood blood
21 chr12:63120000-63124000 Weak transcription HUVEC blood vessel
22 chr12:63120000-63124600 Weak transcription Hela-S3 cervix
23 chr12:63120000-63124800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr12:63120000-63131600 Weak transcription Thymus Thymus
25 chr12:63120600-63123200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr12:63120600-63124600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr12:63120600-63124600 Weak transcription NHEK skin
28 chr12:63120600-63125000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr12:63120600-63125400 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr12:63121000-63124400 Weak transcription HMEC breast
31 chr12:63121000-63124600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr12:63121800-63124200 Enhancers H9 Cell Line embryonic stem cell
33 chr12:63121800-63124200 Enhancers iPS-18 Cell Line embryonic stem cell
34 chr12:63121800-63124400 Enhancers H1 Cell Line embryonic stem cell
35 chr12:63121800-63124600 Enhancers HUES64 Cell Line embryonic stem cell
36 chr12:63121800-63125800 Enhancers HUES6 Cell Line embryonic stem cell
37 chr12:63121800-63128200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
38 chr12:63121800-63133200 Strong transcription HepG2 liver
39 chr12:63122000-63123600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
40 chr12:63122000-63124200 Enhancers Brain Inferior Temporal Lobe brain
41 chr12:63122000-63124600 Enhancers iPS-15b Cell Line embryonic stem cell
42 chr12:63122000-63125000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr12:63122000-63125000 Enhancers NHLF lung
44 chr12:63122000-63125000 Enhancers Osteobl bone
45 chr12:63122000-63125200 Enhancers Brain Cingulate Gyrus brain
46 chr12:63122000-63125400 Enhancers ES-I3 Cell Line embryonic stem cell
47 chr12:63122200-63123000 Enhancers Psoas Muscle Psoas
48 chr12:63122200-63123200 Enhancers Primary neutrophils fromperipheralblood blood
49 chr12:63122200-63123200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr12:63122200-63123200 Enhancers Brain Substantia Nigra brain

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Last update: Aug 31, 2015