Variant report

Variant	rs573678372
Chromosome Location	chr3:116143792-116143793
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2757886	chr3:116142130-116307542	Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	esv2759171	chr3:116142130-116307542	Weak transcription Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:116141800-116143800	Enhancers	Cortex derived primary cultured neurospheres	brain
2	chr3:116142000-116143800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr3:116142000-116143800	Enhancers	Fetal Lung	lung
4	chr3:116142200-116143800	Enhancers	Fetal Stomach	stomach
5	chr3:116142200-116144200	Enhancers	Stomach Mucosa	stomach
6	chr3:116142800-116144000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
7	chr3:116142800-116144000	Enhancers	Pancreatic Islets	Pancreatic Islet
8	chr3:116143000-116143800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr3:116143000-116144000	Enhancers	Brain Anterior Caudate	brain
10	chr3:116143000-116144200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr3:116143000-116144200	Enhancers	Brain Angular Gyrus	brain
12	chr3:116143000-116144400	Enhancers	Brain Substantia Nigra	brain
13	chr3:116143200-116144200	Enhancers	Brain Cingulate Gyrus	brain
14	chr3:116143200-116144200	Enhancers	Brain Hippocampus Middle	brain
15	chr3:116143200-116144200	Enhancers	Brain Inferior Temporal Lobe	brain
16	chr3:116143400-116144400	Enhancers	Colon Smooth Muscle	Colon
17	chr3:116143400-116161200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
18	chr3:116143600-116161000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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