The 2.0 version of rSNPBase

Variant report

Variant rs573695341
Chromosome Location chr13:96255867-96255868
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:96229000-96256200 Weak transcription Gastric stomach
2 chr13:96229600-96256000 Weak transcription Right Ventricle heart
3 chr13:96230200-96258200 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr13:96231600-96260000 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr13:96231800-96256800 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr13:96232200-96272800 Weak transcription Brain Substantia Nigra brain
7 chr13:96235600-96284200 Weak transcription Rectal Smooth Muscle rectum
8 chr13:96238000-96256400 Weak transcription Placenta Placenta
9 chr13:96238200-96261000 Weak transcription Spleen Spleen
10 chr13:96239800-96259800 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr13:96240000-96261200 Weak transcription Colon Smooth Muscle Colon
12 chr13:96240000-96272800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr13:96240000-96273000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr13:96240200-96256000 Weak transcription Fetal Intestine Small intestine
15 chr13:96240200-96256200 Weak transcription Aorta Aorta
16 chr13:96241200-96260800 Weak transcription Fetal Heart heart
17 chr13:96242200-96272600 Weak transcription Brain Angular Gyrus brain
18 chr13:96243200-96256200 Weak transcription Fetal Brain Male brain
19 chr13:96246400-96278600 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr13:96247200-96259600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr13:96247200-96267000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr13:96247800-96256000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr13:96247800-96261200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr13:96247800-96293600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr13:96248000-96256200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr13:96248000-96276600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr13:96248200-96256000 Weak transcription Esophagus oesophagus
28 chr13:96249000-96264800 Strong transcription iPS-18 Cell Line embryonic stem cell
29 chr13:96249400-96272200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr13:96251400-96294400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr13:96252000-96258000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr13:96252000-96259000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr13:96252200-96256000 Strong transcription Fetal Brain Female brain
34 chr13:96252200-96256200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr13:96252200-96256600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr13:96252200-96257000 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr13:96252200-96258400 Strong transcription Fetal Stomach stomach
38 chr13:96252800-96260000 Strong transcription HUES6 Cell Line embryonic stem cell
39 chr13:96253400-96259000 Strong transcription NHLF lung
40 chr13:96253400-96264800 Strong transcription iPS-20b Cell Line embryonic stem cell
41 chr13:96253600-96256000 Strong transcription A549 lung
42 chr13:96253600-96257000 Strong transcription H9 Cell Line embryonic stem cell
43 chr13:96253600-96263200 Weak transcription Brain Cingulate Gyrus brain
44 chr13:96254000-96261000 Weak transcription Right Atrium heart
45 chr13:96254200-96256200 Strong transcription NHDF-Ad bronchial
46 chr13:96254200-96256600 Strong transcription Fetal Lung lung
47 chr13:96254200-96265000 Strong transcription HUES64 Cell Line embryonic stem cell
48 chr13:96254400-96256000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr13:96254400-96256200 Weak transcription Left Ventricle heart
50 chr13:96254400-96258800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015