Variant report

Variant	rs573811425
Chromosome Location	chr11:47035013-47035014
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1805201	chr11:46971012-47063429	Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	esv1819852	chr11:46971012-47064542	Enhancers Weak transcription ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
3	esv3334587	chr11:47033726-47035774	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:47026000-47035600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr11:47026600-47036800	Weak transcription	Primary B cells from cord blood	blood
3	chr11:47026600-47042200	Weak transcription	Small Intestine	intestine
4	chr11:47026800-47041000	Weak transcription	Hela-S3	cervix
5	chr11:47026800-47080200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr11:47027000-47040000	Weak transcription	Cortex derived primary cultured neurospheres	brain
7	chr11:47027200-47042000	Weak transcription	Brain Hippocampus Middle	brain
8	chr11:47027400-47039600	Weak transcription	Osteobl	bone
9	chr11:47027400-47056000	Weak transcription	Fetal Intestine Small	intestine
10	chr11:47027800-47048000	Weak transcription	Primary hematopoietic stem cells	blood
11	chr11:47033000-47042000	Weak transcription	Fetal Lung	lung
12	chr11:47034400-47037000	Weak transcription	HepG2	liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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