Variant report

Variant	rs574289903
Chromosome Location	chr7:104726700-104726701
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:104719158..104720755-chr7:104724452..104726723,2	K562	blood:
2	chr7:104717490..104719449-chr7:104726208..104728832,2	K562	blood:
3	chr7:104622359..104624225-chr7:104726075..104728986,2	K562	blood:

Variant related genes	Relation type
ENSG00000005483	Chromatin interaction

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029283	chr7:104571741-104729168	Strong transcription Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	132 gene(s)	inside rSNPs	diseases
2	nsv888927	chr7:104614664-104781644	Enhancers Weak transcription Genic enhancers Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	132 gene(s)	inside rSNPs	diseases
3	nsv608068	chr7:104622402-104757483	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	132 gene(s)	inside rSNPs	diseases
4	esv3377784	chr7:104726466-104728889	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:104677800-104758200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr7:104678000-104812200	Strong transcription	Dnd41	blood
3	chr7:104680600-104727000	Strong transcription	Fetal Thymus	thymus
4	chr7:104681200-104758400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr7:104681200-104760400	Strong transcription	Monocytes-CD14+_RO01746	blood
6	chr7:104681400-104727000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr7:104685600-104759000	Strong transcription	Primary B cells from peripheral blood	blood
8	chr7:104699800-104738400	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
9	chr7:104700800-104726800	Strong transcription	Primary monocytes fromperipheralblood	blood
10	chr7:104701200-104727000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr7:104701400-104758800	Strong transcription	Rectal Mucosa Donor 29	rectum
12	chr7:104701600-104726800	Strong transcription	Rectal Mucosa Donor 31	rectum
13	chr7:104701600-104727000	Strong transcription	Primary T cells fromperipheralblood	blood
14	chr7:104702200-104727000	Strong transcription	iPS-20b Cell Line	embryonic stem cell
15	chr7:104702200-104738200	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr7:104702200-104747800	Weak transcription	Stomach Mucosa	stomach
17	chr7:104702800-104758800	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr7:104703200-104727000	Strong transcription	Liver	Liver
19	chr7:104703400-104727400	Strong transcription	Primary neutrophils fromperipheralblood	blood
20	chr7:104703600-104727000	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
21	chr7:104703600-104759000	Strong transcription	Fetal Intestine Large	intestine
22	chr7:104703800-104735400	Strong transcription	HUES48 Cell Line	embryonic stem cell
23	chr7:104704000-104745200	Weak transcription	Psoas Muscle	Psoas
24	chr7:104704600-104727000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
25	chr7:104705800-104726800	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
26	chr7:104706000-104760200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
27	chr7:104707000-104727000	Strong transcription	GM12878-XiMat	blood
28	chr7:104707000-104739200	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
29	chr7:104707400-104727000	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr7:104707400-104727000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
31	chr7:104707800-104726800	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
32	chr7:104707800-104727000	Strong transcription	Primary T helper naive cells from peripheral blood	blood
33	chr7:104707800-104730000	Strong transcription	Sigmoid Colon	Sigmoid Colon
34	chr7:104708000-104726800	Strong transcription	Fetal Muscle Trunk	muscle
35	chr7:104709600-104744400	Weak transcription	Right Ventricle	heart
36	chr7:104710600-104727000	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
37	chr7:104712000-104727000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
38	chr7:104712400-104727000	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
39	chr7:104712400-104758800	Strong transcription	Primary T helper cells fromperipheralblood	blood
40	chr7:104712600-104736600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
41	chr7:104713200-104726800	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
42	chr7:104713200-104727000	Strong transcription	Primary hematopoietic stem cells	blood
43	chr7:104713600-104735600	Strong transcription	Adipose Nuclei	Adipose
44	chr7:104714600-104727000	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
45	chr7:104714800-104727000	Strong transcription	Cortex derived primary cultured neurospheres	brain
46	chr7:104714800-104727000	Strong transcription	Skeletal Muscle Male	skeletal muscle
47	chr7:104715400-104731600	Weak transcription	Brain Substantia Nigra	brain
48	chr7:104716800-104726800	Strong transcription	Fetal Muscle Leg	muscle
49	chr7:104718200-104750600	Weak transcription	Fetal Brain Male	brain
50	chr7:104718800-104728200	Strong transcription	Fetal Intestine Small	intestine

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