Variant report

Variant	rs57431438
Chromosome Location	chr11:71923472-71923473
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs11821309	1.00[EUR][1000 genomes]
rs17162130	1.00[EUR][1000 genomes]
rs17162141	1.00[EUR][1000 genomes]
rs17847215	1.00[EUR][1000 genomes]
rs2276395	1.00[EUR][1000 genomes]
rs2886351	1.00[EUR][1000 genomes]
rs35340702	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4268536	1.00[EUR][1000 genomes]
rs4475949	1.00[EUR][1000 genomes]
rs4488227	1.00[EUR][1000 genomes]
rs57824428	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs730042	1.00[EUR][1000 genomes]
rs73528804	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73545636	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530623	chr11:71088949-72020418	Enhancers Transcr. at gene 5' and 3' Active TSS Strong transcription Bivalent Enhancer Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	134 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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