The 2.0 version of rSNPBase

Variant report

Variant rs57531416
Chromosome Location chr12:124440920-124440921
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:124417600-124443600 Weak transcription Fetal Kidney kidney
2 chr12:124423600-124442200 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr12:124427000-124455000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr12:124427200-124456200 Weak transcription Esophagus oesophagus
5 chr12:124427800-124444800 Weak transcription Primary hematopoietic stem cells blood
6 chr12:124427800-124453400 Weak transcription A549 lung
7 chr12:124428400-124455800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr12:124428400-124456000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr12:124428800-124449800 Weak transcription HSMM muscle
10 chr12:124428800-124455800 Weak transcription Primary T helper naive cells fromperipheralblood blood
11 chr12:124430000-124454800 Weak transcription Primary T helper cells PMA-I stimulated --
12 chr12:124430000-124456200 Weak transcription Fetal Thymus thymus
13 chr12:124430200-124443600 Weak transcription Colon Smooth Muscle Colon
14 chr12:124430200-124445600 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr12:124430200-124453400 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr12:124430200-124455600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr12:124430400-124443600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr12:124430400-124449800 Weak transcription Primary B cells from peripheral blood blood
19 chr12:124430400-124450400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr12:124430400-124454800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr12:124430400-124455800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr12:124430400-124456000 Weak transcription Primary T regulatory cells fromperipheralblood blood
23 chr12:124430400-124456000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr12:124430400-124456000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr12:124430600-124441800 Weak transcription Primary B cells from cord blood blood
26 chr12:124430600-124443000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr12:124430600-124452600 Weak transcription Primary T helper cells fromperipheralblood blood
28 chr12:124430600-124456200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
29 chr12:124431000-124443000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr12:124431800-124455800 Weak transcription Stomach Smooth Muscle stomach
31 chr12:124434000-124447400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr12:124434200-124447600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr12:124434400-124447200 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr12:124434400-124456200 Weak transcription Primary T cells fromperipheralblood blood
35 chr12:124434600-124450000 Weak transcription Thymus Thymus
36 chr12:124434800-124446000 Weak transcription Duodenum Mucosa Duodenum
37 chr12:124435000-124441200 Weak transcription Primary T cells from cord blood blood
38 chr12:124435000-124444800 Weak transcription Fetal Brain Female brain
39 chr12:124435000-124447800 Weak transcription Liver Liver
40 chr12:124435200-124443000 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr12:124435200-124443000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr12:124435200-124443000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr12:124435200-124443000 Weak transcription Fetal Stomach stomach
44 chr12:124435400-124450800 Weak transcription HSMMtube muscle
45 chr12:124435400-124456000 Weak transcription Skeletal Muscle Female skeletal muscle
46 chr12:124435600-124442800 Weak transcription Fetal Intestine Small intestine
47 chr12:124435600-124444800 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr12:124435600-124450000 Weak transcription Aorta Aorta
49 chr12:124435600-124450000 Weak transcription Fetal Muscle Leg muscle
50 chr12:124435600-124450200 Weak transcription Fetal Muscle Trunk muscle

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015