Variant report

Variant	rs57545427
Chromosome Location	chr14:37524344-37524345
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:37517069..37519596-chr14:37522769..37524947,2	K562	blood:

Extended variants
information (count: 54 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:49)

rs_ID	r²[population]
rs11846664	1.00[EUR][1000 genomes]
rs17105856	1.00[EUR][1000 genomes]
rs17105876	1.00[EUR][1000 genomes]
rs17105909	1.00[EUR][1000 genomes]
rs17105921	1.00[EUR][1000 genomes]
rs17105928	1.00[EUR][1000 genomes]
rs17105938	1.00[EUR][1000 genomes]
rs17105941	1.00[EUR][1000 genomes]
rs17105991	1.00[EUR][1000 genomes]
rs17105999	1.00[EUR][1000 genomes]
rs17106020	1.00[EUR][1000 genomes]
rs17106194	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17106252	1.00[EUR][1000 genomes]
rs17106300	1.00[EUR][1000 genomes]
rs17106370	1.00[EUR][1000 genomes]
rs17106427	1.00[EUR][1000 genomes]
rs17106428	1.00[EUR][1000 genomes]
rs17106431	1.00[EUR][1000 genomes]
rs2093087	0.93[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs2144319	0.97[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs55764696	1.00[EUR][1000 genomes]
rs55987900	1.00[EUR][1000 genomes]
rs56167909	1.00[EUR][1000 genomes]
rs56395950	0.98[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs57432181	1.00[EUR][1000 genomes]
rs60179583	0.87[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs60717098	1.00[EUR][1000 genomes]
rs60846053	1.00[EUR][1000 genomes]
rs60910364	1.00[EUR][1000 genomes]
rs61200961	1.00[EUR][1000 genomes]
rs7147703	1.00[EUR][1000 genomes]
rs73256266	1.00[EUR][1000 genomes]
rs73256270	1.00[EUR][1000 genomes]
rs73256271	1.00[EUR][1000 genomes]
rs73256284	1.00[EUR][1000 genomes]
rs73256290	1.00[EUR][1000 genomes]
rs73256295	1.00[EUR][1000 genomes]
rs73258212	1.00[EUR][1000 genomes]
rs73260317	0.96[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73260392	0.97[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73264172	1.00[EUR][1000 genomes]
rs73266178	1.00[EUR][1000 genomes]
rs74045252	1.00[EUR][1000 genomes]
rs74045477	0.97[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs8009539	1.00[EUR][1000 genomes]
rs8009729	1.00[EUR][1000 genomes]
rs8012371	0.88[AFR][1000 genomes]
rs9671258	1.00[EUR][1000 genomes]
rs9672077	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534288	chr14:37254539-37697745	Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	17 gene(s)	inside rSNPs	diseases
2	nsv1036201	chr14:37498841-37542041	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv1037719	chr14:37498841-37546359	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv526786	chr14:37499904-37537352	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv1048854	chr14:37505438-37546359	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:37521000-37525800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr14:37521600-37525800	Weak transcription	HUES48 Cell Line	embryonic stem cell
3	chr14:37523800-37525800	Weak transcription	HSMMtube	muscle

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