The 2.0 version of rSNPBase

Variant report

Variant rs575464602
Chromosome Location chr6:151028602-151028603
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:151015200-151033200 Weak transcription Right Atrium heart
2 chr6:151017600-151029200 Weak transcription Lung lung
3 chr6:151019000-151033000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr6:151019000-151033200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr6:151019000-151035200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr6:151021400-151029000 Weak transcription Left Ventricle heart
7 chr6:151021600-151033000 Weak transcription Fetal Stomach stomach
8 chr6:151021600-151040600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr6:151024200-151034200 Weak transcription Right Ventricle heart
10 chr6:151024400-151028800 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr6:151024400-151032800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr6:151025400-151029000 Weak transcription Primary monocytes fromperipheralblood blood
13 chr6:151025400-151029000 Weak transcription Monocytes-CD14+_RO01746 blood
14 chr6:151025600-151033200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr6:151025800-151031400 Weak transcription Esophagus oesophagus
16 chr6:151026000-151029000 Weak transcription Brain Anterior Caudate brain
17 chr6:151026000-151030800 Weak transcription Stomach Mucosa stomach
18 chr6:151026000-151033600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr6:151026200-151031200 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr6:151026400-151031000 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr6:151026800-151029000 Weak transcription Fetal Muscle Leg muscle
22 chr6:151026800-151033200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr6:151026800-151043600 Weak transcription Fetal Muscle Trunk muscle
24 chr6:151027000-151033200 Weak transcription Fetal Intestine Small intestine
25 chr6:151027200-151033000 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr6:151027400-151033200 Weak transcription Fetal Kidney kidney
27 chr6:151028400-151029400 Enhancers Fetal Thymus thymus
28 chr6:151028400-151029800 Genic enhancers Primary B cells from cord blood blood
29 chr6:151028600-151029000 Enhancers Primary B cells from peripheral blood blood
30 chr6:151028600-151029000 Enhancers Small Intestine intestine
31 chr6:151028600-151029200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr6:151028600-151029200 Enhancers Fetal Lung lung
33 chr6:151028600-151029200 Strong transcription Thymus Thymus
34 chr6:151028600-151029400 Enhancers Brain Inferior Temporal Lobe brain
35 chr6:151028600-151029400 Enhancers Placenta Placenta
36 chr6:151028600-151029400 Enhancers Sigmoid Colon Sigmoid Colon
37 chr6:151028600-151029400 Enhancers Skeletal Muscle Male skeletal muscle
38 chr6:151028600-151029600 Enhancers Fetal Adrenal Gland Adrenal Gland
39 chr6:151028600-151029600 Genic enhancers Spleen Spleen
40 chr6:151028600-151029800 Enhancers Adipose Nuclei Adipose

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Last update: Aug 31, 2015