The 2.0 version of rSNPBase

Variant report

Variant rs57555315
Chromosome Location chr2:33606395-33606396
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:33529800-33609400 Weak transcription Right Ventricle heart
2 chr2:33578800-33612200 Weak transcription Fetal Kidney kidney
3 chr2:33581600-33611400 Weak transcription Fetal Stomach stomach
4 chr2:33588400-33624400 Weak transcription Gastric stomach
5 chr2:33589200-33623000 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr2:33590600-33615800 Weak transcription Fetal Muscle Trunk muscle
7 chr2:33590600-33624800 Weak transcription Fetal Adrenal Gland Adrenal Gland
8 chr2:33590800-33612600 Weak transcription Ovary ovary
9 chr2:33591400-33616000 Weak transcription Colon Smooth Muscle Colon
10 chr2:33592000-33624800 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr2:33595200-33609200 Weak transcription Left Ventricle heart
12 chr2:33596200-33614400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr2:33596400-33613800 Weak transcription Liver Liver
14 chr2:33597000-33609000 Weak transcription Fetal Heart heart
15 chr2:33597200-33622200 Weak transcription Fetal Muscle Leg muscle
16 chr2:33597400-33610200 Weak transcription Stomach Smooth Muscle stomach
17 chr2:33602200-33613600 Weak transcription NHLF lung
18 chr2:33602800-33607600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr2:33603000-33610600 Weak transcription Aorta Aorta
20 chr2:33603200-33610600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr2:33603200-33611200 Weak transcription Osteobl bone
22 chr2:33604200-33607400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr2:33604200-33609000 Weak transcription NHDF-Ad bronchial
24 chr2:33604200-33613000 Weak transcription NH-A brain
25 chr2:33604200-33614000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr2:33604200-33616600 Weak transcription Muscle Satellite Cultured Cells --
27 chr2:33604200-33624800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr2:33604600-33623600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr2:33604800-33607400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr2:33604800-33607600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr2:33604800-33612400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr2:33604800-33612600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr2:33604800-33614000 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr2:33604800-33616200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr2:33604800-33616800 Weak transcription Brain Anterior Caudate brain
36 chr2:33605000-33609000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr2:33605200-33606800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr2:33605200-33607000 Enhancers Primary hematopoietic stem cells blood
39 chr2:33605200-33607000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr2:33605200-33609200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr2:33605400-33607000 Enhancers Primary B cells from cord blood blood
42 chr2:33605400-33616000 Weak transcription Brain Hippocampus Middle brain
43 chr2:33605600-33606800 Enhancers Primary B cells from peripheral blood blood
44 chr2:33605800-33606800 Enhancers Fetal Lung lung
45 chr2:33606000-33606600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr2:33606000-33606800 Enhancers Primary hematopoietic stem cells short term culture blood
47 chr2:33606200-33606400 Enhancers Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015