Variant report
| Variant | rs575786546 |
|---|---|
| Chromosome Location | chr12:50605651-50605652 |
| allele | -/TT |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:50571800-50614200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 2 | chr12:50572200-50614000 | Weak transcription | Right Ventricle | heart |
| 3 | chr12:50582800-50614000 | Weak transcription | Brain Angular Gyrus | brain |
| 4 | chr12:50582800-50614200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 5 | chr12:50583000-50614400 | Weak transcription | Brain Anterior Caudate | brain |
| 6 | chr12:50591600-50615600 | Weak transcription | HepG2 | liver |
| 7 | chr12:50593400-50614200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 8 | chr12:50593400-50614200 | Weak transcription | Fetal Brain Male | brain |
| 9 | chr12:50593400-50614600 | Weak transcription | Esophagus | oesophagus |
| 10 | chr12:50596200-50613400 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 11 | chr12:50596600-50607200 | Strong transcription | Fetal Intestine Small | intestine |
| 12 | chr12:50596800-50607600 | Weak transcription | Stomach Mucosa | stomach |
| 13 | chr12:50596800-50614000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 14 | chr12:50597800-50608800 | Strong transcription | Fetal Intestine Large | intestine |
| 15 | chr12:50598400-50605800 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 16 | chr12:50598400-50611400 | Weak transcription | Spleen | Spleen |
| 17 | chr12:50598400-50613400 | Weak transcription | K562 | blood |
| 18 | chr12:50598600-50612400 | Weak transcription | Psoas Muscle | Psoas |
| 19 | chr12:50598600-50613400 | Weak transcription | Aorta | Aorta |
| 20 | chr12:50598600-50613400 | Weak transcription | Fetal Kidney | kidney |
| 21 | chr12:50598600-50614000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 22 | chr12:50598600-50614000 | Weak transcription | Brain Germinal Matrix | brain |
| 23 | chr12:50599000-50612000 | Weak transcription | Gastric | stomach |
| 24 | chr12:50599000-50614200 | Weak transcription | Fetal Brain Female | brain |
| 25 | chr12:50599200-50614200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 26 | chr12:50599400-50606000 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 27 | chr12:50599400-50614000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 28 | chr12:50599400-50615000 | Weak transcription | Liver | Liver |
| 29 | chr12:50599600-50610200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 30 | chr12:50599600-50613400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 31 | chr12:50599600-50613400 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 32 | chr12:50599600-50614000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 33 | chr12:50599600-50614000 | Weak transcription | Brain Hippocampus Middle | brain |
| 34 | chr12:50599600-50614000 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 35 | chr12:50599800-50608400 | Weak transcription | Small Intestine | intestine |
| 36 | chr12:50599800-50608800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 37 | chr12:50599800-50612400 | Weak transcription | Colon Smooth Muscle | Colon |
| 38 | chr12:50599800-50613400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 39 | chr12:50599800-50613600 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 40 | chr12:50599800-50614000 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 41 | chr12:50599800-50614000 | Weak transcription | Left Ventricle | heart |
| 42 | chr12:50599800-50614600 | Weak transcription | Ovary | ovary |
| 43 | chr12:50599800-50635800 | Weak transcription | Pancreas | Pancrea |
| 44 | chr12:50600000-50613400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 45 | chr12:50600000-50613600 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 46 | chr12:50600000-50615800 | Weak transcription | Lung | lung |
| 47 | chr12:50600200-50611200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 48 | chr12:50600200-50613400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 49 | chr12:50600200-50614000 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 50 | chr12:50600200-50614200 | Weak transcription | Primary hematopoietic stem cells | blood |
