| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1065410 |
chr19:52103914-52889530 |
Genic enhancers Enhancers ZNF genes & repeats Weak transcription Strong transcription Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
596 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
esv3366000 |
chr19:52491073-52842946 |
Strong transcription ZNF genes & repeats Weak transcription Genic enhancers Flanking Active TSS Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
48 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1066015 |
chr19:52502213-52890308 |
Flanking Active TSS ZNF genes & repeats Enhancers Weak transcription Genic enhancers Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
49 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv544059 |
chr19:52502213-52890308 |
Active TSS Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
49 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
esv3441119 |
chr19:52756399-52762539 |
Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
n/a
|
