Variant report

Variant	rs577032400
Chromosome Location	chr6:81283216-81283217
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:23 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531333	chr6:81042427-81836484	Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
2	nsv1019670	chr6:81086504-81569984	ZNF genes & repeats Enhancers Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
3	nsv915714	chr6:81134888-81366749	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Genic enhancers Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
4	nsv886312	chr6:81166178-81309481	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
5	nsv463908	chr6:81232993-81287675	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	nsv604054	chr6:81232993-81287675	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
7	esv998220	chr6:81258085-81298829	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
8	nsv522523	chr6:81262988-81298688	Enhancers Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
9	esv2757182	chr6:81265495-81304211	Enhancers Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
10	esv2759448	chr6:81265495-81304211	Enhancers Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
11	esv2763979	chr6:81271296-81295103	Active TSS Weak transcription Enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
12	nsv523216	chr6:81274336-81287675	Enhancers Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
13	nsv1022350	chr6:81275753-81289522	Enhancers Weak transcription Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
14	nsv1032533	chr6:81275753-81294402	Weak transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
15	nsv1016976	chr6:81276080-81289522	Enhancers Active TSS Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
16	nsv604055	chr6:81276726-81293161	Enhancers Weak transcription Active TSS	n/a	n/a	inside rSNPs	diseases
17	nsv970721	chr6:81277532-81291968	Enhancers Active TSS Weak transcription	n/a	n/a	inside rSNPs	diseases
18	nsv7933	chr6:81277557-81293811	Active TSS Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
19	nsv1031949	chr6:81277973-81289522	Enhancers Weak transcription Active TSS	n/a	n/a	inside rSNPs	diseases
20	nsv1016156	chr6:81277973-81294402	Enhancers Weak transcription Active TSS	n/a	n/a	inside rSNPs	diseases
21	esv3584851	chr6:81277985-81289534	Weak transcription Active TSS Enhancers	n/a	n/a	inside rSNPs	diseases
22	esv3474618	chr6:81282833-81287331	Active TSS Enhancers	n/a	n/a	inside rSNPs	diseases
23	esv3474621	chr6:81282833-81287331	Active TSS Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:81283200-81283600	Enhancers	H1 Cell Line	embryonic stem cell
2	chr6:81283200-81283600	Active TSS	HUES6 Cell Line	embryonic stem cell
3	chr6:81283200-81283800	Active TSS	ES-I3 Cell Line	embryonic stem cell

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