Variant report

Variant rs57715967
Chromosome Location chr15:34448641-34448642
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:34429800-34456800 Weak transcription Brain Inferior Temporal Lobe brain
2 chr15:34431200-34453200 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr15:34433400-34453200 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr15:34434000-34453000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr15:34434400-34450200 Strong transcription Fetal Muscle Trunk muscle
6 chr15:34435800-34453000 Weak transcription Stomach Mucosa stomach
7 chr15:34437200-34449600 Strong transcription Stomach Smooth Muscle stomach
8 chr15:34438400-34453000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr15:34439000-34454600 Weak transcription Brain Angular Gyrus brain
10 chr15:34443400-34449400 Weak transcription Fetal Brain Male brain
11 chr15:34443400-34450600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr15:34443400-34453000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr15:34443400-34453400 Weak transcription Colon Smooth Muscle Colon
14 chr15:34443400-34456400 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr15:34444000-34455400 Weak transcription Brain Anterior Caudate brain
16 chr15:34444400-34453200 Weak transcription Spleen Spleen
17 chr15:34444400-34456400 Weak transcription Brain Cingulate Gyrus brain
18 chr15:34444600-34449600 ZNF genes & repeats HMEC breast
19 chr15:34444800-34450400 ZNF genes & repeats A549 lung
20 chr15:34444800-34453000 Weak transcription Fetal Thymus thymus
21 chr15:34444800-34453200 Weak transcription Placenta Amnion Placenta Amnion
22 chr15:34445000-34449600 ZNF genes & repeats NHEK skin
23 chr15:34445200-34448800 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr15:34445200-34453000 Weak transcription Lung lung
25 chr15:34445400-34459600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr15:34445600-34449800 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr15:34445600-34450000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
28 chr15:34445800-34449000 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr15:34445800-34449400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
30 chr15:34445800-34449600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr15:34445800-34449600 Strong transcription Right Ventricle heart
32 chr15:34445800-34450000 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
33 chr15:34445800-34455600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr15:34445800-34459400 ZNF genes & repeats Primary hematopoietic stem cells blood
35 chr15:34446000-34449000 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr15:34446200-34448800 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
37 chr15:34446200-34448800 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
38 chr15:34446200-34449000 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
39 chr15:34446200-34449000 Strong transcription Fetal Brain Female brain
40 chr15:34446200-34449000 ZNF genes & repeats GM12878-XiMat blood
41 chr15:34446200-34450000 ZNF genes & repeats Primary T cells from cord blood blood
42 chr15:34446200-34456000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr15:34446400-34449000 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
44 chr15:34446400-34449400 ZNF genes & repeats Primary B cells from peripheral blood blood
45 chr15:34446400-34449800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
46 chr15:34446400-34449800 Strong transcription Psoas Muscle Psoas
47 chr15:34446400-34450400 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr15:34446400-34450400 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
49 chr15:34446400-34451400 ZNF genes & repeats Dnd41 blood
50 chr15:34446800-34449000 ZNF genes & repeats Cortex derived primary cultured neurospheres brain

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