The 2.0 version of rSNPBase

Variant report

Variant rs577306797
Chromosome Location chr7:105307772-105307773
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:105247000-105308800 Strong transcription Monocytes-CD14+_RO01746 blood
2 chr7:105280800-105319400 Weak transcription Aorta Aorta
3 chr7:105284000-105313200 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr7:105286400-105307800 Strong transcription Primary monocytes fromperipheralblood blood
5 chr7:105289800-105313200 Weak transcription Psoas Muscle Psoas
6 chr7:105290400-105307800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
7 chr7:105290400-105311800 Weak transcription NHEK skin
8 chr7:105290400-105321800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr7:105290800-105311000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr7:105296400-105313000 Weak transcription Brain Angular Gyrus brain
11 chr7:105296400-105313200 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr7:105296600-105313200 Weak transcription Brain Hippocampus Middle brain
13 chr7:105296600-105313800 Weak transcription Small Intestine intestine
14 chr7:105296800-105314000 Weak transcription Brain Inferior Temporal Lobe brain
15 chr7:105297000-105313400 Weak transcription Right Ventricle heart
16 chr7:105297000-105317400 Weak transcription Stomach Mucosa stomach
17 chr7:105302000-105319200 Weak transcription Osteobl bone
18 chr7:105302200-105319200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr7:105303800-105313400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr7:105303800-105313400 Weak transcription Left Ventricle heart
21 chr7:105303800-105313400 Weak transcription Rectal Smooth Muscle rectum
22 chr7:105303800-105314400 Weak transcription Esophagus oesophagus
23 chr7:105303800-105317400 Weak transcription Colonic Mucosa Colon
24 chr7:105304000-105313400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr7:105304000-105313800 Weak transcription Fetal Lung lung
26 chr7:105304200-105309000 Weak transcription Ovary ovary
27 chr7:105304200-105313000 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr7:105304200-105317400 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr7:105304400-105313000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr7:105304400-105317600 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr7:105304800-105307800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr7:105304800-105313000 Weak transcription Primary T killer naive cells fromperipheralblood blood
33 chr7:105304800-105314000 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr7:105305000-105317400 Weak transcription Fetal Intestine Large intestine
35 chr7:105305200-105307800 Enhancers Cortex derived primary cultured neurospheres brain
36 chr7:105305400-105307800 Enhancers H9 Cell Line embryonic stem cell
37 chr7:105305400-105307800 Enhancers iPS-20b Cell Line embryonic stem cell
38 chr7:105305600-105307800 Enhancers ES-I3 Cell Line embryonic stem cell
39 chr7:105305600-105307800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr7:105305600-105307800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
41 chr7:105305600-105308600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
42 chr7:105305600-105310200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr7:105305600-105313200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr7:105305600-105313800 Weak transcription Fetal Adrenal Gland Adrenal Gland
45 chr7:105305600-105318400 Weak transcription NHLF lung
46 chr7:105305800-105313000 Weak transcription Stomach Smooth Muscle stomach
47 chr7:105305800-105313400 Weak transcription Fetal Muscle Trunk muscle
48 chr7:105305800-105313800 Weak transcription Brain Substantia Nigra brain
49 chr7:105305800-105313800 Weak transcription Colon Smooth Muscle Colon
50 chr7:105305800-105313800 Weak transcription Right Atrium heart

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Last update: Aug 31, 2015