Variant report
| Variant | rs578019159 |
|---|---|
| Chromosome Location | chr19:43003478-43003479 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr19:42997000-43003800 | Enhancers | Fetal Intestine Small | intestine |
| 2 | chr19:42998000-43004800 | Enhancers | Fetal Intestine Large | intestine |
| 3 | chr19:43000600-43003600 | Enhancers | Fetal Kidney | kidney |
| 4 | chr19:43000600-43003800 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 5 | chr19:43001000-43003600 | Enhancers | Brain Hippocampus Middle | brain |
| 6 | chr19:43001200-43003800 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
| 7 | chr19:43001400-43003600 | Enhancers | Brain Anterior Caudate | brain |
| 8 | chr19:43001400-43003600 | Enhancers | Brain Cingulate Gyrus | brain |
| 9 | chr19:43001400-43003600 | Enhancers | Stomach Mucosa | stomach |
| 10 | chr19:43001800-43003600 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 11 | chr19:43001800-43003600 | Enhancers | Brain Angular Gyrus | brain |
| 12 | chr19:43001800-43003600 | Enhancers | Brain Inferior Temporal Lobe | brain |
| 13 | chr19:43001800-43003600 | Enhancers | Brain Substantia Nigra | brain |
| 14 | chr19:43001800-43003600 | Enhancers | Colonic Mucosa | Colon |
| 15 | chr19:43001800-43009400 | Weak transcription | Aorta | Aorta |
| 16 | chr19:43002000-43008600 | Weak transcription | Right Ventricle | heart |
| 17 | chr19:43002200-43015000 | Weak transcription | Spleen | Spleen |
| 18 | chr19:43002200-43025200 | Weak transcription | Primary hematopoietic stem cells | blood |
| 19 | chr19:43002400-43004000 | Enhancers | Rectal Mucosa Donor 31 | rectum |
| 20 | chr19:43002400-43022400 | Weak transcription | Lung | lung |
| 21 | chr19:43002600-43004000 | Enhancers | Pancreatic Islets | Pancreatic Islet |
| 22 | chr19:43002600-43010200 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 23 | chr19:43002800-43003600 | Enhancers | Liver | Liver |
| 24 | chr19:43002800-43014800 | Weak transcription | Adipose Nuclei | Adipose |
| 25 | chr19:43002800-43014800 | Weak transcription | Left Ventricle | heart |
| 26 | chr19:43002800-43023000 | Weak transcription | Gastric | stomach |
| 27 | chr19:43003000-43003600 | Enhancers | A549 | lung |
| 28 | chr19:43003000-43005400 | Enhancers | HepG2 | liver |
| 29 | chr19:43003000-43013400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 30 | chr19:43003200-43003600 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 31 | chr19:43003200-43003600 | Enhancers | Brain Dorsolateral Prefrontal Cortex | brain |
| 32 | chr19:43003200-43003600 | Enhancers | Duodenum Mucosa | Duodenum |
| 33 | chr19:43003200-43008400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 34 | chr19:43003200-43014600 | Weak transcription | Primary B cells from cord blood | blood |
| 35 | chr19:43003200-43030600 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 36 | chr19:43003400-43003600 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 37 | chr19:43003400-43009400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 38 | chr19:43003400-43012800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 39 | chr19:43003400-43014600 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 40 | chr19:43003400-43015200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 41 | chr19:43003400-43019000 | Weak transcription | Placenta | Placenta |
| 42 | chr19:43003400-43028400 | Weak transcription | Esophagus | oesophagus |
| 43 | chr19:43003400-43029400 | Weak transcription | Small Intestine | intestine |
