Variant report

Variant	rs57802016
Chromosome Location	chr14:85840055-85840056
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs11846239	0.91[AMR][1000 genomes]
rs11848194	0.91[AMR][1000 genomes]
rs11850250	0.91[AMR][1000 genomes]
rs140614	0.91[AMR][1000 genomes]
rs28680491	0.91[AMR][1000 genomes]
rs28706922	0.83[AMR][1000 genomes]
rs28729624	0.81[AFR][1000 genomes]
rs28833867	0.85[AMR][1000 genomes]
rs28871975	0.91[AMR][1000 genomes]
rs58358811	0.91[AMR][1000 genomes]
rs8022920	1.00[AMR][1000 genomes]
rs9972170	0.91[AMR][1000 genomes]
rs9972174	0.91[AMR][1000 genomes]
rs9972265	0.91[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1047924	chr14:85826280-85868228	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:85832400-85840200	Weak transcription	Ovary	ovary

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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