Variant report

Variant	rs57913129
Chromosome Location	chr4:125691382-125691383
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 53 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:52)

rs_ID	r²[population]
rs10004258	0.80[AMR][1000 genomes]
rs10016531	0.94[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs10020410	0.80[AMR][1000 genomes]
rs10022783	1.00[EUR][1000 genomes]
rs10025388	0.80[AMR][1000 genomes]
rs10025549	0.94[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs10029144	0.94[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs10033965	1.00[EUR][1000 genomes]
rs10212646	1.00[EUR][1000 genomes]
rs11098771	0.94[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs11098772	0.94[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs11934333	0.80[AMR][1000 genomes]
rs1506553	0.81[ASN][1000 genomes]
rs1506554	0.81[ASN][1000 genomes]
rs17008761	1.00[EUR][1000 genomes]
rs17008774	1.00[EUR][1000 genomes]
rs2390746	1.00[EUR][1000 genomes]
rs28373772	1.00[EUR][1000 genomes]
rs28456115	0.94[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs28461891	1.00[EUR][1000 genomes]
rs28492009	1.00[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs28683747	1.00[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs28878515	1.00[EUR][1000 genomes]
rs2893091	1.00[EUR][1000 genomes]
rs2893108	1.00[EUR][1000 genomes]
rs56234259	1.00[EUR][1000 genomes]
rs56276915	1.00[EUR][1000 genomes]
rs56819477	1.00[EUR][1000 genomes]
rs58495425	1.00[EUR][1000 genomes]
rs58752358	1.00[EUR][1000 genomes]
rs58898118	1.00[EUR][1000 genomes]
rs59571426	1.00[EUR][1000 genomes]
rs60218356	1.00[EUR][1000 genomes]
rs72912728	1.00[EUR][1000 genomes]
rs72912730	1.00[EUR][1000 genomes]
rs72912744	1.00[EUR][1000 genomes]
rs72912745	1.00[EUR][1000 genomes]
rs72912777	1.00[EUR][1000 genomes]
rs72923360	1.00[EUR][1000 genomes]
rs72923361	1.00[EUR][1000 genomes]
rs72923363	1.00[EUR][1000 genomes]
rs72923389	1.00[EUR][1000 genomes]
rs72923400	1.00[EUR][1000 genomes]
rs73845286	1.00[EUR][1000 genomes]
rs73845302	1.00[EUR][1000 genomes]
rs73845816	1.00[EUR][1000 genomes]
rs73845820	1.00[EUR][1000 genomes]
rs73848116	1.00[EUR][1000 genomes]
rs7667465	1.00[EUR][1000 genomes]
rs9631739	0.80[AMR][1000 genomes]
rs9884176	0.84[AMR][1000 genomes]
rs9996211	0.80[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879882	chr4:125662969-125703938	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:125689800-125692000	Enhancers	Fetal Lung	lung
2	chr4:125690800-125691400	Enhancers	Colon Smooth Muscle	Colon

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