The 2.0 version of rSNPBase

Variant report

Variant rs57935471
Chromosome Location chr1:215760248-215760249
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:215741800-215786200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:215741800-215809800 Weak transcription Colonic Mucosa Colon
3 chr1:215742000-215786400 Weak transcription Thymus Thymus
4 chr1:215742200-215767600 Weak transcription Placenta Amnion Placenta Amnion
5 chr1:215742200-215786400 Weak transcription Primary T cells from cord blood blood
6 chr1:215743000-215772400 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr1:215743200-215785800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr1:215744200-215767400 Weak transcription Fetal Brain Male brain
9 chr1:215744400-215767600 Weak transcription NHLF lung
10 chr1:215746600-215768000 Weak transcription Rectal Smooth Muscle rectum
11 chr1:215748000-215764000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr1:215748200-215760600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr1:215749400-215762600 Strong transcription Breast Myoepithelial Primary Cells Breast
14 chr1:215750000-215763200 Weak transcription Brain Cingulate Gyrus brain
15 chr1:215750000-215767600 Weak transcription Right Ventricle heart
16 chr1:215750000-215772800 Weak transcription Psoas Muscle Psoas
17 chr1:215750000-215778600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr1:215750000-215786200 Weak transcription Small Intestine intestine
19 chr1:215750000-215805000 Weak transcription Lung lung
20 chr1:215750200-215766200 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr1:215750200-215785800 Weak transcription H9 Cell Line embryonic stem cell
22 chr1:215750200-215786200 Weak transcription Pancreas Pancrea
23 chr1:215750200-215790400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr1:215750200-215795400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr1:215750200-215796000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
26 chr1:215750200-215804400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr1:215750200-215809200 Weak transcription Gastric stomach
28 chr1:215750400-215760400 Strong transcription Fetal Lung lung
29 chr1:215750400-215765400 Weak transcription Brain Angular Gyrus brain
30 chr1:215751800-215768600 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr1:215752800-215781400 Weak transcription Hela-S3 cervix
32 chr1:215753000-215767600 Weak transcription HSMMtube muscle
33 chr1:215753200-215792200 Weak transcription Aorta Aorta
34 chr1:215753400-215764800 Weak transcription Esophagus oesophagus
35 chr1:215753400-215772600 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr1:215753400-215778600 Weak transcription Fetal Thymus thymus
37 chr1:215754000-215767600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
38 chr1:215754000-215767600 Weak transcription HSMM muscle
39 chr1:215754600-215762400 Weak transcription Fetal Intestine Small intestine
40 chr1:215754600-215762400 Weak transcription Fetal Stomach stomach
41 chr1:215755400-215767600 Weak transcription Brain Anterior Caudate brain
42 chr1:215755400-215768800 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr1:215755600-215762000 Weak transcription Colon Smooth Muscle Colon
44 chr1:215755800-215763000 Weak transcription NHDF-Ad bronchial
45 chr1:215755800-215764800 Weak transcription NH-A brain
46 chr1:215755800-215767600 Weak transcription Osteobl bone
47 chr1:215755800-215776200 Weak transcription Monocytes-CD14+_RO01746 blood
48 chr1:215755800-215804800 Weak transcription ES-WA7 Cell Line embryonic stem cell
49 chr1:215756000-215770600 Weak transcription Primary monocytes fromperipheralblood blood
50 chr1:215756200-215769200 Weak transcription Rectal Mucosa Donor 31 rectum

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Last update: Aug 31, 2015