Variant report

Variant	rs57962549
Chromosome Location	chr2:184336865-184336866
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:184335971..184338207-chr2:184339965..184342303,2	K562	blood:
2	chr2:184323777..184326254-chr2:184334006..184337138,3	MCF-7	breast:

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs1098920	1.00[EUR][1000 genomes]
rs1663648	1.00[EUR][1000 genomes]
rs2091739	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2103379	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2118474	1.00[EUR][1000 genomes]
rs2164852	1.00[EUR][1000 genomes]
rs56088806	0.95[AFR][1000 genomes]
rs56395447	1.00[EUR][1000 genomes]
rs57756154	0.95[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59225772	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59781911	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59897746	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6756380	0.95[AFR][1000 genomes]
rs73040580	1.00[EUR][1000 genomes]
rs73042641	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73042643	1.00[EUR][1000 genomes]
rs842540	1.00[EUR][1000 genomes]
rs842547	1.00[EUR][1000 genomes]
rs842550	1.00[EUR][1000 genomes]
rs842557	1.00[EUR][1000 genomes]
rs842558	1.00[EUR][1000 genomes]
rs842559	1.00[EUR][1000 genomes]
rs842560	1.00[EUR][1000 genomes]
rs842562	1.00[EUR][1000 genomes]
rs842565	1.00[EUR][1000 genomes]
rs842570	1.00[EUR][1000 genomes]
rs842571	1.00[EUR][1000 genomes]
rs842574	1.00[EUR][1000 genomes]
rs842575	1.00[EUR][1000 genomes]
rs842576	1.00[EUR][1000 genomes]
rs842577	1.00[EUR][1000 genomes]
rs842582	1.00[EUR][1000 genomes]
rs842587	1.00[EUR][1000 genomes]
rs842588	1.00[EUR][1000 genomes]
rs842589	1.00[EUR][1000 genomes]
rs842592	1.00[EUR][1000 genomes]
rs842593	1.00[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:184335600-184337000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr2:184336000-184337200	Weak transcription	Brain Hippocampus Middle	brain
3	chr2:184336200-184337000	Enhancers	H9 Cell Line	embryonic stem cell
4	chr2:184336600-184337000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr2:184336800-184337000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr2:184336800-184337000	Enhancers	Pancreas	Pancrea

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