Variant report

Variant rs58069228
Chromosome Location chr17:16173372-16173373
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:16133800-16176200 Weak transcription NHEK skin
2 chr17:16154400-16176600 Weak transcription Hela-S3 cervix
3 chr17:16157400-16185200 Weak transcription Gastric stomach
4 chr17:16159200-16178400 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr17:16159400-16189200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr17:16159600-16188800 Weak transcription Stomach Smooth Muscle stomach
7 chr17:16159600-16189000 Weak transcription Brain Anterior Caudate brain
8 chr17:16160000-16183000 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr17:16160400-16188400 Weak transcription Liver Liver
10 chr17:16163400-16189200 Weak transcription Left Ventricle heart
11 chr17:16163600-16189200 Weak transcription Pancreas Pancrea
12 chr17:16164000-16176400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr17:16164000-16176400 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr17:16164000-16180800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr17:16164000-16182400 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr17:16164000-16182400 Weak transcription Fetal Muscle Leg muscle
17 chr17:16164000-16185000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr17:16164000-16189000 Weak transcription Fetal Brain Female brain
19 chr17:16164000-16189000 Weak transcription Rectal Smooth Muscle rectum
20 chr17:16164200-16182200 Weak transcription Fetal Stomach stomach
21 chr17:16164600-16176000 Weak transcription Fetal Intestine Small intestine
22 chr17:16164600-16182200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr17:16166200-16205400 Weak transcription Brain Hippocampus Middle brain
24 chr17:16168600-16188800 Weak transcription Fetal Intestine Large intestine
25 chr17:16169200-16176400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr17:16170600-16173400 Enhancers Primary T killer naive cells fromperipheralblood blood
27 chr17:16171000-16181600 Weak transcription HepG2 liver
28 chr17:16171200-16175600 Weak transcription A549 lung
29 chr17:16171400-16188200 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr17:16171400-16189000 Weak transcription Spleen Spleen
31 chr17:16171600-16173400 Enhancers Primary T cells fromperipheralblood blood
32 chr17:16171600-16173400 Enhancers Primary T helper naive cells fromperipheralblood blood
33 chr17:16171600-16175800 Weak transcription Small Intestine intestine
34 chr17:16171600-16176400 Weak transcription K562 blood
35 chr17:16171600-16178000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr17:16171600-16182200 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr17:16171600-16188200 Weak transcription Duodenum Mucosa Duodenum
38 chr17:16171800-16173400 Enhancers Primary T helper cells PMA-I stimulated --
39 chr17:16171800-16177800 Weak transcription Primary hematopoietic stem cells blood
40 chr17:16172000-16173400 Enhancers Primary T killer memory cells from peripheral blood blood
41 chr17:16172000-16180400 Weak transcription Primary hematopoietic stem cells short term culture blood
42 chr17:16172000-16185200 Weak transcription Lung lung
43 chr17:16172600-16188200 Weak transcription GM12878-XiMat blood
44 chr17:16172800-16173400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr17:16172800-16173400 Enhancers Muscle Satellite Cultured Cells --
46 chr17:16172800-16173400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
47 chr17:16172800-16173400 Enhancers Osteobl bone
48 chr17:16172800-16173600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
49 chr17:16172800-16173600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr17:16172800-16173600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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