Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs12309271	1.00[EUR][1000 genomes]
rs2860600	1.00[EUR][1000 genomes]
rs2906861	1.00[EUR][1000 genomes]
rs55916709	1.00[AMR][1000 genomes]
rs56215754	1.00[AMR][1000 genomes]
rs57329873	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58019545	1.00[AMR][1000 genomes]
rs58123354	1.00[AMR][1000 genomes]
rs58429466	1.00[AMR][1000 genomes]
rs58752621	1.00[EUR][1000 genomes]
rs58828387	1.00[EUR][1000 genomes]
rs58918170	1.00[AMR][1000 genomes]
rs59155952	1.00[AMR][1000 genomes]
rs61260239	1.00[AMR][1000 genomes]
rs7294696	1.00[AMR][1000 genomes]
rs7297341	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7303763	1.00[AMR][1000 genomes]
rs73320687	1.00[EUR][1000 genomes]
rs73322739	1.00[AMR][1000 genomes]
rs73322745	1.00[AMR][1000 genomes]
rs73322755	1.00[AMR][1000 genomes]
rs74099722	1.00[EUR][1000 genomes]
rs74099862	1.00[AMR][1000 genomes]
rs74099863	1.00[AMR][1000 genomes]
rs7964651	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3411149	chr12:68066948-68435533	Enhancers Active TSS Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:68265800-68270400	Weak transcription	Fetal Intestine Large	intestine
2	chr12:68267800-68270000	Weak transcription	H1 Cell Line	embryonic stem cell
3	chr12:68267800-68270000	Weak transcription	iPS-18 Cell Line	embryonic stem cell

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