The 2.0 version of rSNPBase

Variant report

Variant rs58248415
Chromosome Location chr2:33416931-33416932
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:33394000-33420600 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr2:33403800-33418800 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr2:33403800-33489800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr2:33406400-33419400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr2:33408000-33422400 Weak transcription Brain Inferior Temporal Lobe brain
6 chr2:33408200-33423000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr2:33409000-33417200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr2:33409200-33441600 Weak transcription Psoas Muscle Psoas
9 chr2:33410400-33423800 Weak transcription Placenta Placenta
10 chr2:33410400-33438000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr2:33411600-33421200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr2:33412000-33418200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr2:33412200-33420600 Weak transcription Colon Smooth Muscle Colon
14 chr2:33412400-33419200 Weak transcription Esophagus oesophagus
15 chr2:33412400-33421400 Weak transcription HUES64 Cell Line embryonic stem cell
16 chr2:33412800-33419200 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr2:33413000-33417600 Strong transcription NH-A brain
18 chr2:33414000-33427800 Weak transcription Right Ventricle heart
19 chr2:33414000-33434200 Weak transcription HUVEC blood vessel
20 chr2:33414200-33422400 Weak transcription Brain Hippocampus Middle brain
21 chr2:33414600-33417000 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr2:33414600-33422400 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr2:33414600-33455400 Weak transcription Fetal Stomach stomach
24 chr2:33414800-33417000 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr2:33414800-33417800 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr2:33415000-33434400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr2:33415200-33417000 Enhancers Fetal Heart heart
28 chr2:33415200-33417400 Enhancers Fetal Lung lung
29 chr2:33415200-33427600 Weak transcription Left Ventricle heart
30 chr2:33415200-33441600 Weak transcription Fetal Muscle Trunk muscle
31 chr2:33415400-33418400 Weak transcription Muscle Satellite Cultured Cells --
32 chr2:33415400-33441600 Weak transcription Fetal Muscle Leg muscle
33 chr2:33415600-33427000 Weak transcription Stomach Smooth Muscle stomach
34 chr2:33415600-33431800 Weak transcription NHDF-Ad bronchial
35 chr2:33415600-33434200 Weak transcription K562 blood
36 chr2:33415800-33418000 Weak transcription Ovary ovary
37 chr2:33415800-33419200 Weak transcription Aorta Aorta
38 chr2:33415800-33431800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr2:33416000-33417200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr2:33416000-33417200 Weak transcription Liver Liver
41 chr2:33416000-33418200 Weak transcription NHLF lung
42 chr2:33416200-33417200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr2:33416400-33417200 Weak transcription Osteobl bone
44 chr2:33416800-33417400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015