Variant report

Variant	rs58370575
Chromosome Location	chr11:33955707-33955708
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:33910951..33914653-chr11:33954857..33958781,3	K562	blood:
2	chr11:33953627..33955865-chr11:33956245..33959179,2	MCF-7	breast:
3	chr11:33946058..33948161-chr11:33954233..33957576,4	K562	blood:
4	chr11:33922306..33926817-chr11:33953309..33957386,4	K562	blood:
5	chr11:33889269..33895208-chr11:33954915..33958884,6	K562	blood:

Variant related genes	Relation type
ENSG00000135363	Chromatin interaction

rs_ID	r²[population]
rs1401355	1.00[AMR][1000 genomes]
rs2421460	1.00[AMR][1000 genomes]
rs34017560	1.00[AMR][1000 genomes]
rs36003235	1.00[AMR][1000 genomes]
rs57509132	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61735314	1.00[AMR][1000 genomes]
rs7112880	1.00[AMR][1000 genomes]

Chromatin state (count:35 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:33944400-33960000	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr11:33949000-33956000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr11:33951000-33959800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr11:33951600-33957600	Enhancers	Fetal Kidney	kidney
5	chr11:33952400-33959400	Enhancers	Spleen	Spleen
6	chr11:33952600-33957000	Weak transcription	Left Ventricle	heart
7	chr11:33952600-33958600	Enhancers	HUVEC	blood vessel
8	chr11:33952800-33955800	Weak transcription	Brain Inferior Temporal Lobe	brain
9	chr11:33952800-33956000	Weak transcription	Skeletal Muscle Female	skeletal muscle
10	chr11:33952800-33957600	Weak transcription	Brain Cingulate Gyrus	brain
11	chr11:33952800-33959400	Enhancers	Adipose Nuclei	Adipose
12	chr11:33952800-33959600	Enhancers	Primary monocytes fromperipheralblood	blood
13	chr11:33953000-33956400	Weak transcription	Skeletal Muscle Male	skeletal muscle
14	chr11:33953000-33958400	Weak transcription	Brain Hippocampus Middle	brain
15	chr11:33953000-33958600	Weak transcription	Duodenum Smooth Muscle	Duodenum
16	chr11:33953200-33956000	Weak transcription	Brain Anterior Caudate	brain
17	chr11:33953200-33956400	Weak transcription	Fetal Stomach	stomach
18	chr11:33953200-33957000	Weak transcription	Fetal Muscle Trunk	muscle
19	chr11:33953200-33957600	Enhancers	Primary neutrophils fromperipheralblood	blood
20	chr11:33953200-33959600	Enhancers	Primary hematopoietic stem cells	blood
21	chr11:33953400-33956000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
22	chr11:33953400-33956000	Weak transcription	Fetal Lung	lung
23	chr11:33953600-33957400	Enhancers	Fetal Intestine Large	intestine
24	chr11:33954200-33956200	Weak transcription	Thymus	Thymus
25	chr11:33954400-33956000	Weak transcription	Lung	lung
26	chr11:33954600-33957200	Enhancers	Fetal Intestine Small	intestine
27	chr11:33954600-33958400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
28	chr11:33954800-33957000	Enhancers	K562	blood
29	chr11:33955000-33956000	Weak transcription	Fetal Muscle Leg	muscle
30	chr11:33955000-33958400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
31	chr11:33955000-33960000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
32	chr11:33955200-33956000	Enhancers	Pancreatic Islets	Pancreatic Islet
33	chr11:33955400-33955800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
34	chr11:33955600-33956200	Enhancers	Monocytes-CD14+_RO01746	blood
35	chr11:33955600-33957000	Weak transcription	Placenta	Placenta

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