The 2.0 version of rSNPBase

Variant report

Variant rs58506278
Chromosome Location chr5:118417627-118417628
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:118407600-118423600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr5:118407800-118421600 Weak transcription Fetal Muscle Trunk muscle
3 chr5:118407800-118456600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr5:118408400-118451800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr5:118409000-118420400 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr5:118409000-118424000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr5:118409000-118435000 Weak transcription Lung lung
8 chr5:118409000-118471200 Weak transcription Gastric stomach
9 chr5:118409200-118418000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
10 chr5:118409200-118419400 Weak transcription Fetal Stomach stomach
11 chr5:118409200-118424000 Weak transcription Primary T regulatory cells fromperipheralblood blood
12 chr5:118409400-118421000 Weak transcription Primary hematopoietic stem cells blood
13 chr5:118409400-118435000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr5:118409800-118423200 Weak transcription Fetal Intestine Large intestine
15 chr5:118410400-118419600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
16 chr5:118410600-118418000 Weak transcription Brain Cingulate Gyrus brain
17 chr5:118410600-118418400 Weak transcription Primary monocytes fromperipheralblood blood
18 chr5:118410800-118418400 Weak transcription Monocytes-CD14+_RO01746 blood
19 chr5:118410800-118421200 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr5:118411200-118435000 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr5:118412000-118435000 Weak transcription Duodenum Mucosa Duodenum
22 chr5:118412200-118432800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr5:118412200-118522800 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr5:118412400-118424000 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr5:118412400-118435000 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr5:118414000-118423800 Weak transcription Liver Liver
27 chr5:118414000-118425800 Weak transcription Primary T cells fromperipheralblood blood
28 chr5:118414400-118472200 Weak transcription Pancreas Pancrea
29 chr5:118415000-118418000 Weak transcription Fetal Intestine Small intestine
30 chr5:118415000-118421400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr5:118415000-118426800 Weak transcription Fetal Lung lung
32 chr5:118415000-118435000 Weak transcription Stomach Smooth Muscle stomach
33 chr5:118415200-118418000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr5:118415200-118418200 Weak transcription Fetal Heart heart
35 chr5:118415200-118419000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr5:118415200-118419600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr5:118415200-118419800 Weak transcription Thymus Thymus
38 chr5:118415200-118420800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr5:118415200-118423400 Weak transcription Small Intestine intestine
40 chr5:118415200-118435000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr5:118415200-118435200 Weak transcription HepG2 liver
42 chr5:118415200-118443800 Weak transcription Primary T cells from cord blood blood
43 chr5:118415200-118447800 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr5:118415400-118421600 Weak transcription Primary T helper naive cells fromperipheralblood blood
45 chr5:118415400-118421600 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr5:118415400-118471600 Weak transcription Right Ventricle heart
47 chr5:118415600-118421800 Weak transcription Fetal Adrenal Gland Adrenal Gland
48 chr5:118415600-118422200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
49 chr5:118415600-118434600 Weak transcription Dnd41 blood
50 chr5:118415800-118433600 Weak transcription Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015