Variant report
| Variant | rs58585173 |
|---|---|
| Chromosome Location | chr13:96367155-96367156 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr13:96347000-96377600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 2 | chr13:96351000-96368600 | Weak transcription | Lung | lung |
| 3 | chr13:96356000-96372400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 4 | chr13:96356600-96393600 | Weak transcription | Right Ventricle | heart |
| 5 | chr13:96359400-96386200 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 6 | chr13:96359800-96368000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 7 | chr13:96359800-96379200 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 8 | chr13:96360400-96369400 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 9 | chr13:96360600-96367200 | Weak transcription | Gastric | stomach |
| 10 | chr13:96360600-96379200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 11 | chr13:96360600-96383000 | Weak transcription | K562 | blood |
| 12 | chr13:96360600-96384000 | Weak transcription | Small Intestine | intestine |
| 13 | chr13:96360800-96374400 | Weak transcription | Colon Smooth Muscle | Colon |
| 14 | chr13:96361000-96367200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 15 | chr13:96361000-96368600 | Weak transcription | Pancreas | Pancrea |
| 16 | chr13:96361000-96371000 | Weak transcription | Aorta | Aorta |
| 17 | chr13:96361000-96380600 | Weak transcription | Fetal Heart | heart |
| 18 | chr13:96361000-96393600 | Weak transcription | Spleen | Spleen |
| 19 | chr13:96361200-96368400 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 20 | chr13:96362200-96367600 | Strong transcription | Liver | Liver |
| 21 | chr13:96362200-96371200 | Strong transcription | Primary T cells from cord blood | blood |
| 22 | chr13:96362400-96385800 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 23 | chr13:96362800-96393800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 24 | chr13:96363200-96375600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 25 | chr13:96363200-96380000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 26 | chr13:96363600-96367600 | ZNF genes & repeats | Primary hematopoietic stem cells | blood |
| 27 | chr13:96364200-96386200 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 28 | chr13:96364600-96384400 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 29 | chr13:96364600-96385400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 30 | chr13:96364800-96377400 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 31 | chr13:96365000-96367200 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 32 | chr13:96365000-96367400 | Weak transcription | Fetal Stomach | stomach |
| 33 | chr13:96365000-96368600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 34 | chr13:96365000-96368600 | Weak transcription | Esophagus | oesophagus |
| 35 | chr13:96365200-96367600 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 36 | chr13:96365200-96367800 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 37 | chr13:96365200-96368000 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 38 | chr13:96365400-96367800 | Enhancers | NHDF-Ad | bronchial |
| 39 | chr13:96365400-96368000 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 40 | chr13:96365400-96368400 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 41 | chr13:96365400-96383800 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 42 | chr13:96365400-96383800 | Weak transcription | Thymus | Thymus |
| 43 | chr13:96365600-96367600 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 44 | chr13:96365600-96367800 | Enhancers | HMEC | breast |
| 45 | chr13:96365600-96375800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 46 | chr13:96365600-96384600 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 47 | chr13:96365800-96367600 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 48 | chr13:96365800-96367600 | Enhancers | Osteobl | bone |
| 49 | chr13:96365800-96367800 | Enhancers | Primary monocytes fromperipheralblood | blood |
| 50 | chr13:96365800-96367800 | Flanking Active TSS | Primary neutrophils fromperipheralblood | blood |
