The 2.0 version of rSNPBase

Variant report

Variant rs58645875
Chromosome Location chr7:105374909-105374910
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:105352600-105388600 Weak transcription Aorta Aorta
2 chr7:105352800-105383000 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr7:105352800-105383800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr7:105352800-105392400 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr7:105354400-105382400 Weak transcription Primary T cells from cord blood blood
6 chr7:105354400-105390000 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr7:105354400-105399800 Weak transcription Ovary ovary
8 chr7:105354600-105392000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr7:105354800-105387600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr7:105355000-105401000 Weak transcription NHEK skin
11 chr7:105355800-105381800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr7:105357200-105379200 Weak transcription Thymus Thymus
13 chr7:105359800-105406200 Weak transcription Gastric stomach
14 chr7:105359800-105438600 Weak transcription Pancreas Pancrea
15 chr7:105360000-105391400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr7:105360400-105382600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr7:105360600-105375000 Weak transcription NHLF lung
18 chr7:105360600-105388200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr7:105360800-105406200 Weak transcription Fetal Muscle Leg muscle
20 chr7:105361200-105394400 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr7:105362000-105381400 Weak transcription Fetal Intestine Small intestine
22 chr7:105362800-105375000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr7:105362800-105383800 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr7:105364400-105383800 Weak transcription Lung lung
25 chr7:105364400-105402000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr7:105364600-105375000 Weak transcription Fetal Stomach stomach
27 chr7:105364600-105390400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr7:105364600-105393000 Weak transcription Brain Inferior Temporal Lobe brain
29 chr7:105364600-105416400 Weak transcription Brain Angular Gyrus brain
30 chr7:105366600-105390200 Weak transcription Fetal Muscle Trunk muscle
31 chr7:105367200-105428800 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr7:105367400-105376200 Weak transcription iPS-20b Cell Line embryonic stem cell
33 chr7:105367400-105391600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr7:105368000-105377800 Weak transcription Fetal Intestine Large intestine
35 chr7:105374400-105375000 Flanking Active TSS Pancreatic Islets Pancreatic Islet
36 chr7:105374400-105390400 Weak transcription Primary T cells fromperipheralblood blood
37 chr7:105374600-105375000 Enhancers Fetal Adrenal Gland Adrenal Gland
38 chr7:105374800-105375000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr7:105374800-105375000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
40 chr7:105374800-105375000 Enhancers HUES6 Cell Line embryonic stem cell
41 chr7:105374800-105375000 Enhancers Stomach Mucosa stomach
42 chr7:105374800-105375000 Enhancers Stomach Smooth Muscle stomach
43 chr7:105374800-105375000 Enhancers Spleen Spleen
44 chr7:105374800-105375200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr7:105374800-105375200 Flanking Active TSS Colon Smooth Muscle Colon
46 chr7:105374800-105375200 Enhancers Placenta Amnion Placenta Amnion
47 chr7:105374800-105375600 Enhancers Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015