Variant report

Variant	rs58722379
Chromosome Location	chr1:211296169-211296170
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs11119680	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11119684	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11119690	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11119698	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12036302	0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12119695	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1338351	0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1933523	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2066023	0.82[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2066024	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3811395	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4512717	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6663683	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6703560	0.80[EUR][1000 genomes]
rs72741110	0.95[ASN][1000 genomes]
rs7525019	0.91[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211280800-211300200	Weak transcription	HSMMtube	muscle
2	chr1:211285600-211299400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr1:211292400-211298000	Weak transcription	A549	lung
4	chr1:211292400-211298200	Weak transcription	HSMM	muscle
5	chr1:211292800-211305400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr1:211293200-211299400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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