The 2.0 version of rSNPBase

Variant report

Variant rs58727441
Chromosome Location chr7:104667848-104667849
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:104656600-104681800 Weak transcription Fetal Muscle Trunk muscle
2 chr7:104658600-104671800 Enhancers Primary T killer naive cells fromperipheralblood blood
3 chr7:104658600-104673000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr7:104658600-104674000 Weak transcription Fetal Thymus thymus
5 chr7:104658600-104674200 Weak transcription Fetal Muscle Leg muscle
6 chr7:104658600-104681200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr7:104658600-104703800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr7:104658800-104671600 Weak transcription Fetal Intestine Small intestine
9 chr7:104658800-104681800 Weak transcription Thymus Thymus
10 chr7:104659400-104671400 Enhancers Primary T helper naive cells from peripheral blood blood
11 chr7:104659600-104671400 Enhancers Primary T killer memory cells from peripheral blood blood
12 chr7:104659800-104681200 Weak transcription HUES6 Cell Line embryonic stem cell
13 chr7:104660400-104668600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr7:104661000-104668600 Weak transcription Left Ventricle heart
15 chr7:104661600-104671200 Enhancers Primary T helper cells fromperipheralblood blood
16 chr7:104661800-104696000 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr7:104662000-104668800 Weak transcription Fetal Stomach stomach
18 chr7:104662000-104671600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
19 chr7:104662000-104672000 Enhancers Primary T helper naive cells fromperipheralblood blood
20 chr7:104662200-104668600 Weak transcription Spleen Spleen
21 chr7:104662200-104668800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr7:104662600-104668600 Enhancers Primary T helper 17 cells PMA-I stimulated --
23 chr7:104662600-104671600 Enhancers Primary T regulatory cells fromperipheralblood blood
24 chr7:104662800-104670200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
25 chr7:104663000-104669800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr7:104663200-104679400 Weak transcription Fetal Brain Female brain
27 chr7:104663600-104670800 Weak transcription Fetal Kidney kidney
28 chr7:104663800-104669200 Enhancers Monocytes-CD14+_RO01746 blood
29 chr7:104664000-104668200 Enhancers Duodenum Smooth Muscle Duodenum
30 chr7:104664200-104668200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr7:104664200-104668200 Enhancers A549 lung
32 chr7:104664400-104668000 Enhancers Rectal Smooth Muscle rectum
33 chr7:104664400-104681200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr7:104664600-104668000 Enhancers Duodenum Mucosa Duodenum
35 chr7:104664600-104668200 Enhancers Fetal Heart heart
36 chr7:104664600-104669200 Enhancers Rectal Mucosa Donor 31 rectum
37 chr7:104664600-104671000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
38 chr7:104664800-104668000 Enhancers Brain Substantia Nigra brain
39 chr7:104664800-104668200 Enhancers Skeletal Muscle Male skeletal muscle
40 chr7:104664800-104669200 Enhancers Brain Hippocampus Middle brain
41 chr7:104664800-104669200 Enhancers Skeletal Muscle Female skeletal muscle
42 chr7:104664800-104669200 Enhancers Stomach Mucosa stomach
43 chr7:104665000-104668000 Enhancers NHLF lung
44 chr7:104665200-104668000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr7:104665200-104679200 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr7:104665400-104668000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr7:104665400-104669600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr7:104665400-104671000 Weak transcription Aorta Aorta
49 chr7:104665400-104673800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr7:104665600-104669200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015