Variant report
| Variant | rs58891998 |
|---|---|
| Chromosome Location | chr12:39712283-39712284 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:39685200-39714400 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 2 | chr12:39686600-39722400 | Weak transcription | GM12878-XiMat | blood |
| 3 | chr12:39686600-39725400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 4 | chr12:39686800-39729800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 5 | chr12:39686800-39738800 | Weak transcription | Pancreas | Pancrea |
| 6 | chr12:39687200-39726400 | Weak transcription | Fetal Intestine Small | intestine |
| 7 | chr12:39687600-39723800 | Weak transcription | Duodenum Mucosa | Duodenum |
| 8 | chr12:39688400-39724600 | Weak transcription | Esophagus | oesophagus |
| 9 | chr12:39688400-39726400 | Weak transcription | Aorta | Aorta |
| 10 | chr12:39689000-39724000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 11 | chr12:39689600-39725400 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 12 | chr12:39690400-39715200 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 13 | chr12:39695000-39726400 | Weak transcription | Fetal Intestine Large | intestine |
| 14 | chr12:39695000-39726400 | Weak transcription | HepG2 | liver |
| 15 | chr12:39695600-39724000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 16 | chr12:39695600-39742000 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 17 | chr12:39696600-39762200 | Weak transcription | Fetal Brain Male | brain |
| 18 | chr12:39697800-39771800 | Weak transcription | Fetal Kidney | kidney |
| 19 | chr12:39698000-39724400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 20 | chr12:39698200-39724400 | Weak transcription | K562 | blood |
| 21 | chr12:39698600-39724000 | Weak transcription | Brain Anterior Caudate | brain |
| 22 | chr12:39698600-39724000 | Weak transcription | Brain Substantia Nigra | brain |
| 23 | chr12:39698600-39725200 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 24 | chr12:39698600-39725400 | Weak transcription | Brain Hippocampus Middle | brain |
| 25 | chr12:39699600-39724600 | Weak transcription | Brain Angular Gyrus | brain |
| 26 | chr12:39699600-39760600 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 27 | chr12:39700000-39721400 | Weak transcription | Fetal Heart | heart |
| 28 | chr12:39700600-39723400 | Weak transcription | Adipose Nuclei | Adipose |
| 29 | chr12:39700600-39724000 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 30 | chr12:39700800-39724000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 31 | chr12:39701000-39726400 | Weak transcription | Left Ventricle | heart |
| 32 | chr12:39701200-39716400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 33 | chr12:39701400-39724000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 34 | chr12:39701600-39716400 | Weak transcription | Brain Germinal Matrix | brain |
| 35 | chr12:39701600-39718200 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 36 | chr12:39701600-39723800 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 37 | chr12:39701600-39723800 | Weak transcription | Brain Cingulate Gyrus | brain |
| 38 | chr12:39701600-39724000 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 39 | chr12:39701600-39725000 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 40 | chr12:39701800-39713000 | Weak transcription | Fetal Brain Female | brain |
| 41 | chr12:39701800-39724400 | Weak transcription | HMEC | breast |
| 42 | chr12:39704200-39746200 | Weak transcription | HUVEC | blood vessel |
| 43 | chr12:39704600-39718800 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 44 | chr12:39704600-39723200 | Weak transcription | NHEK | skin |
| 45 | chr12:39704800-39713000 | Weak transcription | Liver | Liver |
| 46 | chr12:39705800-39713000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 47 | chr12:39705800-39722200 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 48 | chr12:39709600-39713800 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 49 | chr12:39710800-39724800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 50 | chr12:39711200-39726400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
