The 2.0 version of rSNPBase

Variant report

Variant rs58913566
Chromosome Location chr5:145196092-145196093
allele A/C/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:145158400-145196400 Weak transcription Primary hematopoietic stem cells short term culture blood
2 chr5:145158400-145207000 Weak transcription Esophagus oesophagus
3 chr5:145162800-145198200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr5:145162800-145212800 Weak transcription Rectal Smooth Muscle rectum
5 chr5:145167400-145200600 Weak transcription Fetal Adrenal Gland Adrenal Gland
6 chr5:145168000-145203600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr5:145170600-145213400 Weak transcription Placenta Amnion Placenta Amnion
8 chr5:145172800-145196200 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr5:145172800-145214200 Weak transcription Right Ventricle heart
10 chr5:145174200-145209200 Weak transcription Colon Smooth Muscle Colon
11 chr5:145175200-145205000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr5:145177200-145206800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr5:145177200-145209000 Weak transcription Muscle Satellite Cultured Cells --
14 chr5:145177200-145209200 Weak transcription NH-A brain
15 chr5:145177400-145209000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr5:145179200-145207000 Weak transcription Pancreas Pancrea
17 chr5:145179400-145209400 Weak transcription Stomach Mucosa stomach
18 chr5:145182800-145207000 Weak transcription Small Intestine intestine
19 chr5:145183400-145197200 Weak transcription HMEC breast
20 chr5:145183600-145197400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr5:145183600-145214000 Weak transcription Fetal Kidney kidney
22 chr5:145185800-145202400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr5:145187000-145209200 Weak transcription A549 lung
24 chr5:145187400-145197200 Weak transcription Aorta Aorta
25 chr5:145189200-145200000 Weak transcription Osteobl bone
26 chr5:145190200-145196600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr5:145191600-145199600 Weak transcription Fetal Muscle Leg muscle
28 chr5:145191600-145206400 Weak transcription Liver Liver
29 chr5:145191800-145199800 Weak transcription HUVEC blood vessel
30 chr5:145192000-145196400 Weak transcription iPS-20b Cell Line embryonic stem cell
31 chr5:145192000-145203600 Weak transcription Adipose Nuclei Adipose
32 chr5:145192400-145203600 Weak transcription Left Ventricle heart
33 chr5:145192800-145200600 Weak transcription Lung lung
34 chr5:145192800-145209200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr5:145193000-145204000 Weak transcription Spleen Spleen
36 chr5:145193200-145197400 Weak transcription Fetal Heart heart
37 chr5:145193800-145201400 Strong transcription Rectal Mucosa Donor 31 rectum
38 chr5:145193800-145202000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr5:145194000-145196800 Strong transcription Fetal Stomach stomach
40 chr5:145194000-145197000 Strong transcription Fetal Intestine Small intestine
41 chr5:145194000-145199600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr5:145194000-145201000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr5:145194400-145196200 Strong transcription Gastric stomach
44 chr5:145194400-145198200 Strong transcription Duodenum Smooth Muscle Duodenum
45 chr5:145194400-145201800 Strong transcription Breast Myoepithelial Primary Cells Breast
46 chr5:145194400-145201800 Strong transcription Fetal Intestine Large intestine
47 chr5:145194600-145197800 Strong transcription Primary hematopoietic stem cells blood
48 chr5:145194800-145197400 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr5:145194800-145209000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr5:145195000-145197200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015