Variant report

Variant rs58984468
Chromosome Location chr11:70905990-70905991
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:70891800-70908400 Weak transcription A549 lung
2 chr11:70892000-70913000 Weak transcription Stomach Mucosa stomach
3 chr11:70892800-70915400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr11:70893200-70915400 Weak transcription H1 Cell Line embryonic stem cell
5 chr11:70895800-70917000 Weak transcription HUES6 Cell Line embryonic stem cell
6 chr11:70899200-70910400 Weak transcription Fetal Kidney kidney
7 chr11:70899800-70917200 Weak transcription HUES48 Cell Line embryonic stem cell
8 chr11:70901800-70916200 Weak transcription Lung lung
9 chr11:70902000-70906200 Enhancers Fetal Intestine Large intestine
10 chr11:70902000-70908200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr11:70902000-70909000 Weak transcription Fetal Stomach stomach
12 chr11:70902400-70909200 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr11:70902600-70909600 Weak transcription Pancreas Pancrea
14 chr11:70903000-70906000 Genic enhancers Fetal Intestine Small intestine
15 chr11:70903400-70906000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr11:70904200-70906000 Enhancers Liver Liver
17 chr11:70904200-70906000 Enhancers Colonic Mucosa Colon
18 chr11:70904200-70906000 Enhancers Rectal Mucosa Donor 31 rectum
19 chr11:70904400-70906000 Enhancers Sigmoid Colon Sigmoid Colon
20 chr11:70904800-70906000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
21 chr11:70905200-70913000 Weak transcription Gastric stomach
22 chr11:70905400-70906200 Enhancers Duodenum Mucosa Duodenum
23 chr11:70905400-70910600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr11:70905600-70906000 Enhancers ES-I3 Cell Line embryonic stem cell
25 chr11:70905600-70906000 Enhancers Rectal Mucosa Donor 29 rectum
26 chr11:70905600-70909600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr11:70905800-70906000 Genic enhancers H9 Cell Line embryonic stem cell
28 chr11:70905800-70906000 Enhancers iPS-20b Cell Line embryonic stem cell
29 chr11:70905800-70906600 Enhancers HepG2 liver

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