The 2.0 version of rSNPBase

Variant report

Variant rs59002621
Chromosome Location chr2:11834240-11834241
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:11828800-11836800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr2:11829000-11836600 Weak transcription Fetal Thymus thymus
3 chr2:11829000-11836600 Weak transcription Right Atrium heart
4 chr2:11829000-11836800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr2:11829200-11836000 Weak transcription Primary hematopoietic stem cells blood
6 chr2:11829200-11836400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr2:11829200-11836600 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr2:11829200-11836600 Weak transcription Brain Hippocampus Middle brain
9 chr2:11829200-11836800 Weak transcription HUVEC blood vessel
10 chr2:11829200-11837000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr2:11829200-11837000 Weak transcription HSMM muscle
12 chr2:11829200-11838400 Weak transcription Fetal Lung lung
13 chr2:11829400-11836400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr2:11829400-11836600 Weak transcription Brain Anterior Caudate brain
15 chr2:11829400-11836600 Weak transcription NHEK skin
16 chr2:11829400-11836800 Weak transcription Brain Substantia Nigra brain
17 chr2:11829400-11836800 Weak transcription Colon Smooth Muscle Colon
18 chr2:11829400-11837000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr2:11829400-11837000 Weak transcription Fetal Heart heart
20 chr2:11829400-11841800 Weak transcription Primary B cells from cord blood blood
21 chr2:11831800-11835200 Weak transcription Primary hematopoietic stem cells short term culture blood
22 chr2:11832600-11834600 Weak transcription Psoas Muscle Psoas
23 chr2:11833600-11835400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr2:11833600-11835400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr2:11833600-11836600 Weak transcription A549 lung
26 chr2:11833600-11836600 Weak transcription NHDF-Ad bronchial
27 chr2:11833600-11836800 Weak transcription Primary monocytes fromperipheralblood blood
28 chr2:11833600-11836800 Weak transcription Placenta Placenta
29 chr2:11833600-11836800 Weak transcription Gastric stomach
30 chr2:11833600-11836800 Weak transcription Rectal Smooth Muscle rectum
31 chr2:11833600-11836800 Weak transcription Stomach Smooth Muscle stomach
32 chr2:11833600-11836800 Weak transcription Hela-S3 cervix
33 chr2:11833600-11837000 Weak transcription Primary B cells from peripheral blood blood
34 chr2:11833600-11837000 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr2:11833600-11838000 Weak transcription Brain Cingulate Gyrus brain
36 chr2:11833600-11841800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
37 chr2:11833800-11836400 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr2:11833800-11836400 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr2:11833800-11836600 Weak transcription Ovary ovary
40 chr2:11833800-11836800 Weak transcription Adipose Nuclei Adipose
41 chr2:11833800-11836800 Weak transcription Pancreas Pancrea
42 chr2:11833800-11837000 Weak transcription Colonic Mucosa Colon
43 chr2:11833800-11837400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr2:11833800-11838000 Weak transcription Liver Liver
45 chr2:11833800-11838000 Weak transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015