The 2.0 version of rSNPBase

Variant report

Variant rs59019096
Chromosome Location chr1:211452444-211452445
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211434400-211453200 Weak transcription Small Intestine intestine
2 chr1:211434400-211453400 Weak transcription Spleen Spleen
3 chr1:211434400-211454800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr1:211434400-211487000 Weak transcription Gastric stomach
5 chr1:211434600-211453400 Weak transcription Aorta Aorta
6 chr1:211434600-211454000 Weak transcription Pancreas Pancrea
7 chr1:211434600-211462600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr1:211434600-211478200 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr1:211434800-211453000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr1:211434800-211453400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr1:211434800-211462600 Weak transcription H9 Cell Line embryonic stem cell
12 chr1:211434800-211464800 Weak transcription Right Ventricle heart
13 chr1:211434800-211474200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr1:211435600-211460800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr1:211436200-211456800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr1:211437000-211454600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr1:211438800-211478800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr1:211439800-211478200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr1:211440000-211458200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr1:211440600-211454400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr1:211440800-211481800 Strong transcription Monocytes-CD14+_RO01746 blood
22 chr1:211440800-211483600 Strong transcription Primary monocytes fromperipheralblood blood
23 chr1:211441200-211461200 Strong transcription Primary neutrophils fromperipheralblood blood
24 chr1:211443000-211480000 Strong transcription Dnd41 blood
25 chr1:211443000-211480400 Strong transcription Placenta Placenta
26 chr1:211443200-211460800 Strong transcription Rectal Mucosa Donor 29 rectum
27 chr1:211443200-211484000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr1:211443600-211454400 Strong transcription HUES64 Cell Line embryonic stem cell
29 chr1:211443800-211460400 Strong transcription Primary B cells from peripheral blood blood
30 chr1:211443800-211478200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr1:211444200-211459400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr1:211444400-211454000 Strong transcription Skeletal Muscle Female skeletal muscle
33 chr1:211444400-211479000 Strong transcription Liver Liver
34 chr1:211444600-211454400 Strong transcription HUES48 Cell Line embryonic stem cell
35 chr1:211444600-211454400 Strong transcription HUES6 Cell Line embryonic stem cell
36 chr1:211444600-211457000 Strong transcription Breast Myoepithelial Primary Cells Breast
37 chr1:211444600-211457200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr1:211444600-211459000 Strong transcription Primary hematopoietic stem cells short term culture blood
39 chr1:211444600-211459800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr1:211444600-211471000 Strong transcription iPS-20b Cell Line embryonic stem cell
41 chr1:211444600-211478000 Strong transcription Primary T regulatory cells fromperipheralblood blood
42 chr1:211444600-211479200 Strong transcription Primary T cells fromperipheralblood blood
43 chr1:211444800-211454600 Strong transcription K562 blood
44 chr1:211444800-211455400 Strong transcription iPS-18 Cell Line embryonic stem cell
45 chr1:211444800-211460600 Strong transcription HSMM muscle
46 chr1:211444800-211491200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
47 chr1:211445000-211454000 Strong transcription NHDF-Ad bronchial
48 chr1:211445000-211454400 Strong transcription Primary T helper cells PMA-I stimulated --
49 chr1:211445200-211454000 Weak transcription Fetal Intestine Small intestine
50 chr1:211445200-211454000 Weak transcription Lung lung

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Last update: Aug 31, 2015